Brenneria izadpanahii: HC231_23285
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Entry
HC231_23285 CDS
T07407
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
biz
Brenneria izadpanahii
Pathway
biz03030
DNA replication
biz03410
Base excision repair
biz03420
Nucleotide excision repair
biz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HC231_23285 (polA)
03410 Base excision repair
HC231_23285 (polA)
03420 Nucleotide excision repair
HC231_23285 (polA)
03440 Homologous recombination
HC231_23285 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
biz03032
]
HC231_23285 (polA)
03400 DNA repair and recombination proteins [BR:
biz03400
]
HC231_23285 (polA)
Enzymes [BR:
biz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HC231_23285 (polA)
DNA replication proteins [BR:
biz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HC231_23285 (polA)
DNA repair and recombination proteins [BR:
biz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HC231_23285 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC231_23285 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QTF10519
LinkDB
All DBs
Position
complement(5211251..5214040)
Genome browser
AA seq
929 aa
AA seq
DB search
MTQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLVQYHPTHVAV
VFDAKGKTFRDELFESYKAHRPPMPDDLREQIEPLHRMVKAMGLPLLAVSGVEADDVIGT
LALQAEKSSIPVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYANLDKIADLSFRGSKTMAPKLEQHK
DVAYLSYQLATIKTDVELELSCEQLTVAEPDVDELHRLFSRYEFRRWLSDVESGTWLQGK
KNNQPAQKVTVAAKERSDKEESTAVLSSEGYVVILDEKTLLEWVERIKKAGVFAFDTETD
GLDTLTANLIGMSFAVTPGEAAYLPLAHDYLDAPEQLDRDRILALFKPLLEDEKLLKVGQ
NLKFDKGVMKRYDIELQGIAFDTMLESYVLDSVAGRHDMDSLADRYLGHKTIKFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLYLHQKMWAKLQQHAELCKVFQAIDMPLVPVLSR
MERTGVLIDPNILAEHSQEITIRLGELETQAYELAGEEFNLSSTKQLQGILYEKQKLPVL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPSTKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPEGYSIVAADYSQIELRIMAHLSG
DKGLLRAFSEGKDIHRATAAEVFGLELDKVSSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQHAAEQGYVSTLDGRRLYLPDIQSRNAIARKAA
ERAAINAPMQGTAADIIKKAMIAIDGWLQKDKPLVKMIMQVHDELVFEIHDSVLEESKSK
IKELMEGCMQLNVPLRVDIGTGRNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgactcagattgcagaaaaccctttaattctggtagatggttcctcctatttgtaccgt
gcatatcacgcttttcctccgttaacaaacagtgccggagaaccaacgggtgcaatgtat
ggcgtattgaatatgctgcgaagtttgctggtgcaatatcatcccactcatgtcgccgtg
gtctttgatgccaaaggcaaaacgttccgcgatgagttatttgaaagttataaggcccat
cgtcccccgatgccggatgatttacgcgaacaaatagaacctttgcatcgcatggttaaa
gcgatgggattgccgctattggccgtttccggcgtcgaagccgacgatgttatcggcacg
cttgcgctgcaggccgaaaaatcgagtattccggttttaatcagtaccggtgataaagat
atggctcagttggtaacgccaaacgttacgctgattaacaccatgaacaataccatcctg
ggtccgcaggaagtgtgtgacaagtatggcattccccctgaattaatcattgattttctc
gcgctgatgggcgactcgtccgataacattcccggcgtgcccggcgtgggcgaaaaaacg
gctcaggctttgctgcaagggctgggagggttggatacgctgtatgccaatctggataag
atcgccgatctgtcgttccgaggatccaagacgatggcgccgaagctggagcagcataag
gacgtcgcctacctttcctatcagttggccaccatcaaaacggatgtcgaactggagctg
agctgcgagcagttaaccgtcgctgaaccggatgtggatgaactgcaccgcttattttcc
cgctacgaattcagacgttggctgtcggatgtcgagtccggtacttggttgcagggtaaa
aagaataatcagccggcgcagaaagttacggtagcggctaaagagcgttccgataaagag
gaaagcaccgccgtgctctcttcggaaggctacgtcgtcatcctggatgagaagacgttg
ctggagtgggttgagcgtatcaaaaaagcgggggttttcgcttttgataccgaaaccgat
gggttggacacgcttacagccaatcttatcgggatgtcgtttgccgtgacgccgggcgag
gctgcctatctgccgttggcgcatgattatctggatgcgccggaacagttggatcgcgac
aggattctggcgttgtttaagccgctgctggaagatgaaaagctgttaaaggtcggccag
aatcttaaattcgataagggcgtgatgaaacgctatgacatcgaattacagggcatcgcc
tttgataccatgctggagtcttatgttctggacagcgtcgcggggcgtcacgatatggat
agcctggcggatcgttatcttggccataaaaccatcaaattcgaagagatcgccggcaaa
ggtaaaaatcagcttaccttcaatcagatcgctctggaacaggccggtccctacgctgcg
gaagatgcggatgtcacgctgtatctgcatcagaagatgtgggcgaaattacagcagcat
gcggaactatgtaaggtgttccaggcaatcgacatgccgctggttccggtgttatcccga
atggagcgtaccggcgttcttatcgatcccaatattttggcggaacactcgcaagagatc
accattcgtttgggggaattggaaacacaggcctatgaactggccggcgaagagttcaac
ctgtcgtcaaccaagcagctacagggcattctgtacgagaagcaaaaactgcccgtgctg
aaaaaaacgcccaaaggggcgccttccaccaatgaggaagtgctggctgagctggcgctg
gattatccgctgccgaagctgattcttgaatatcgcggcctggcaaagctgaagtcgacc
tacaccgacaaactgccgctgatgattaatccgtcgaccaagcgcgttcatacttcgtat
catcaggcggtaacggcgaccgggcgcttatcctccagcgatcccaacctgcagaatatt
ccggtgcgtaatgatgaaggccgccgtatccggcaggcgtttattgcgccggaagggtat
agcatcgtagcggctgactattcgcagattgagttacgcatcatggcgcatctttctggc
gataaagggctgctgcgcgcgttctctgaagggaaagatatccaccgggctaccgcggcg
gaagtattcggtcttgaactcgataaagtgtcgtctgagcagcgtcgcagcgctaaggcc
attaactttggtttgatttatggcatgagcgctttcgggctgtcccgccagttgaatatc
ccgcgcagtgaatcacagaagtatatgaatctgtattttgaacgctaccctggcgttcaa
gattatatggagcgaacccgccagcatgccgccgaacaaggctatgtctcgacgttggac
ggccggcgcctctatttgccggatattcagtcgcgtaacgccatcgcccgcaaagccgct
gaacgcgctgcgattaatgcgcccatgcaagggaccgccgccgatattatcaagaaggcg
atgatcgctattgatggctggttacaaaaagacaagccattagtgaagatgattatgcag
gttcacgatgaactggttttcgagattcatgattcggtactggaagagtctaaaagtaaa
atcaaagagttaatggaaggctgtatgcagctcaatgtgccgctgcgggtggatatcggg
accggacggaattgggatgaagcgcattaa
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