Bradyrhizobium diazoefficiens USDA 110: bll0242
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Entry
bll0242 CDS
T00109
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bll0242 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bja03019
]
bll0242 (recQ)
03400 DNA repair and recombination proteins [BR:
bja03400
]
bll0242 (recQ)
Enzymes [BR:
bja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bll0242 (recQ)
Messenger RNA biogenesis [BR:
bja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bll0242 (recQ)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
bll0242 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
BAC45507
UniProt:
Q89XR5
LinkDB
All DBs
Position
complement(236940..238952)
Genome browser
AA seq
670 aa
AA seq
DB search
MERGPSPQLSPRKNGEREKKQRRKRQIVLPRPRSHATGLVTNPTASDTPMNVPSTAPLPA
PANGRDALSVLHSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPSLLREG
CGIVVSPLIALMRDQVAGLLEAGVNAAALNSSLTPQEASDIERRLIAGDLDLLYVAPERL
VTPRCLLMLAQAKVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPEVPRIALTATADE
LTRKEIVERLKLGGSPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERHAGDAGVVYCLS
RNRVEEVAAALDDAGIAALPYHAGLDSSVRSRNQDRFLNEDGIVIVATIAFGMGIDKPDV
RFVAHLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDESSGSDDFKRVS
IGKLDALVGLAETAQCRRRRLLAYFGEIVHGETCGNCDNCLTPPKMRDGKVLAQKLLSCV
YRTGQRFGAMHLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNEKQWRTVLRQLVAMGHLQ
SDSEAYGALKLTEAARGVLRGETEVWLREEVPGTRVRSSRAKSRRGDLAPAASAPQGDVD
PELRARLRSWRSDVARERGVPAYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYG
DELLQIVRTR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagaggcccctcaccccaactctctccccgtaagaacggggagagggagaagaag
cagcggcgcaagcgtcaaatcgtcttgccacgcccgcgcagccatgcgactggccttgtg
acgaatcccacggcctccgacacacccatgaacgtcccttccactgctccgctgcccgcg
ccggccaacggccgcgacgcgctgtcggtgctgcattcggtgttcggcctgccggggttc
cgcggcgcgcagggcgagatcatccggcatgtcaccgatggcggcaattgcctcgtgttg
atgccgaccggcggcggcaagtcgctgtgctaccagctgccgtcgttgctgcgcgaaggc
tgcggcatcgtggtctcgcccttgattgcgctgatgcgcgaccaggttgccggcctgctc
gaggccggggtcaacgccgccgcgctgaactcgtcgctgacgccgcaggaggcctccgac
atcgagcggcgcctgatcgcgggcgatctcgacctgctctatgtcgcgccggaacgactg
gtgacgccgcgctgcctgttgatgctggcgcaggccaaggtggcgctgttcgcgatcgac
gaggcgcactgcgtctcgcaatggggccacgacttccgccccgaatatgtcggcctctcc
atcatcgccgagcgctttcccgaggtgccgcgcatcgcgctgaccgcgaccgccgacgaa
ttgacgcggaaggagatcgttgaacggctcaagcttgggggcagtccgcaattcgtctcg
agcttcgaccgccccaatatccgttacgagatcgtcgacaagcgcaatgcggtgtcgcag
ctcaaggagttcatccgggagcgccatgcgggtgacgccggcgtggtctactgcctgtcg
cgcaaccgggtcgaggaggtcgccgccgcgctcgatgatgccggcatcgccgcgctgccc
tatcacgccgggctcgacagtagcgtgcgctcgcgcaaccaggaccgcttcctcaacgag
gacggcatcgtcatcgtggcgaccatcgccttcggcatgggcatcgacaagcccgacgtg
cgcttcgtcgcgcatctcgatctgcccaagagcatcgaggcctattaccaggagacggga
cgcgccggccgcgatggcaagccgtccgcggcatggatggcctacggcctctccgacatc
gtgcagcaacgccgcatgatcgacgagtccagcggctcggacgatttcaagcgcgtgtcg
atcggcaagctcgacgcgctggtcgggctcgccgagaccgcgcagtgccggcgcaggcgg
ctgctcgcctatttcggcgagatcgtgcacggtgaaacctgcggtaattgcgacaactgc
ctgacgccgccgaagatgcgcgacggcaaggtgctggcgcaaaagctcttgtcctgcgtc
tatcgtaccggccagcgtttcggcgcgatgcacctgatcgacgtgctgatcggtcgcctg
accgagaaggtcacgcagttcggccacgacaagctgtcggtattcggcatcgggcgcgag
ctcaacgaaaagcagtggcgcacggtgctgcggcagctcgtggcgatgggccatttgcag
agcgacagcgaagcttatggcgcactgaagctgacggaggccgcgcgcggcgtgctacgc
ggcgagaccgaggtatggctgcgcgaggaggtgcccggcacccgcgtccgttccagccgc
gcgaaatcccgccgcggcgatctcgcgcctgcggccagcgccccgcaaggcgatgtcgat
cctgaattgcgtgcccggctgcggtcctggcgctcggatgtcgcgcgcgaacgtggcgtg
ccggcctatgtcgtgctgcacgacgccaccattgacggcatcgtgcgggcctggccgacc
acgctggacgagctccgcaacgtgcccggcatcggcgacaagaagctcgagcattatggc
gacgagctgctgcagatcgtgcggacgcggtag
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