Bradyrhizobium diazoefficiens USDA 110: bll0458
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Entry
bll0458 CDS
T00109
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bja03016
]
bll0458 (ligT)
Enzymes [BR:
bja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
bll0458 (ligT)
Transfer RNA biogenesis [BR:
bja03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
bll0458 (ligT)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BAC45723
UniProt:
Q89X57
LinkDB
All DBs
Position
complement(496737..497273)
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AA seq
178 aa
AA seq
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MPRLFTGLEIPAEIGQTLSNLRGGLPGARWIDPENYHVTLRFIGDIDGVSANEIASMLFR
VNRKPFEVKVQGLTSFGGRKPRAVVATIAPSKPLIELQAELERMMQRIGLNPEGRKFIPH
VTLARLHDATDRDVADYLSLRGYFPSKAFMAERFVLFSSRASTGGGPYVVEDAYELCE
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgttcactggtctggaaatcccggccgagatcggccagacgctttccaac
ttgaggggcggccttcccggcgcccgctggatcgatcccgaaaattatcacgtcaccttg
cgcttcatcggcgatatcgacggcgtctccgccaacgagatcgcctcgatgctgtttcgc
gtcaaccgcaaaccgttcgaggtgaaggtgcaggggctgacgagcttcggcggccgcaag
ccgcgcgcggtggtcgccaccatcgcgccgagcaagccgctgatcgaattgcaggccgag
ctcgagcggatgatgcagcggatcggccttaatccggagggacgcaagttcatcccgcac
gtcacgctggcgcgactgcacgacgccaccgaccgtgacgtcgccgactatctgtcgctg
cgcggctacttcccgagcaaggcgttcatggccgaacgttttgtcttgttctcgtcccgt
gcatcgaccggcggcggaccgtatgtggtcgaggacgcctacgagctgtgtgagtag
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