Bradyrhizobium diazoefficiens USDA 110: bll0572
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Entry
bll0572 CDS
T00109
Symbol
bll0572
Name
(GenBank) ORF_ID:bll0572; putative DNA topoisomerase I (EC 5.99.1.2)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bja03032
]
bll0572 (bll0572)
03400 DNA repair and recombination proteins [BR:
bja03400
]
bll0572 (bll0572)
Enzymes [BR:
bja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
bll0572 (bll0572)
DNA replication proteins [BR:
bja03032
]
Prokaryotic type
DNA Topoisomerases
bll0572 (bll0572)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
bll0572 (bll0572)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF905
Motif
Other DBs
NCBI-ProteinID:
BAC45837
UniProt:
Q89WV6
LinkDB
All DBs
Position
complement(612589..613758)
Genome browser
AA seq
389 aa
AA seq
DB search
MMDQQNLGTMRPASADPAAVALAKALGQWPKPAVSGRLSPKKVFDTAPAATVEALARELG
LRLGDQNELTIRRIKRGKGYSFVRPNGAHIRDARTIRRLHAMAVPPAYREVRYSADPSTH
LQAVGRDAAGRLQYRYHADWEKVREHRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTLLKSNVTLEDDCFVLTFKAKGGKAVRKEC
DAAKLVRAIGILRGVPGKRMFQYRDAYGIVRAVNTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPATSQRGRKKQVLDAIRAAADKLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLAQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgatgcggcccgcttcagccgatcctgcagctgtt
gcgctggccaaggccctgggacaatggccgaaaccggccgtttcggggcgtctcagcccg
aaaaaggtcttcgacacggcgcccgcggcgacggtcgaggcgctggccagggagctgggc
ctgcggctcggcgaccagaacgagctgaccatccgccgtatcaagcgcggcaagggctat
tccttcgtccgtcccaacggcgcgcatatccgcgacgcccgcaccatccgccggctgcac
gccatggcggtgccgccggcctatcgcgaggtgcgctactcggccgatccgagcacgcat
ctccaggccgtgggacgcgatgccgcgggccggctgcaataccgctatcacgccgactgg
gagaaggtccgcgagcaccgcaaggcgcatcgcctggagaagctcgtcggcgcgctgcca
aagatccggcgcaaggtgtcggcgttcctgtcgggtgacgagccgacacgcgaattcgcg
ctctcggccgtgatcgagctgatcgcgcgcaccgcgatccgtcccggcaacgaatcctat
gcccgcctcaacggaacccgcggcgcgaccacactgctgaagtcgaacgtgacactggaa
gacgattgcttcgtgctgaccttcaaggcgaagggcggcaaggcggtgcggaaggagtgc
gacgcggccaagctggtgcgcgccatcggcatcctgcgcggcgttcccggcaagcgcatg
ttccagtatcgcgatgcctacggcatcgtgcgcgcggtcaacaccacgcaggtgaacgcg
tttttgcgcgagatcgccggcatcaagatttcgctgaaggattttcgcaccctgatggcc
tccgccgtcgtggtggaatcgctgtcgcggatcacgccggcgaccagccagcgcggccgc
aagaagcaggtgctggacgcgatccgtgccgcggccgacaagctctccaacacgccggcg
atctgccgcaagagctatgtccacgacaccatcgtcaccgccttcgaggacggcattctc
gagcgcttcgccgcgaccatgaagggccagcgctcgcaggcgaggcgcgagcagcttctg
gcgcaggtggtcgcgaccgcggcggtgtaa
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