Bradyrhizobium diazoefficiens USDA 110: bll0779
Help
Entry
bll0779 CDS
T00109
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bll0779 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bja03019
]
bll0779 (pnpA)
03016 Transfer RNA biogenesis [BR:
bja03016
]
bll0779 (pnpA)
Enzymes [BR:
bja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
bll0779 (pnpA)
Messenger RNA biogenesis [BR:
bja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
bll0779 (pnpA)
Transfer RNA biogenesis [BR:
bja03016
]
Prokaryotic type
tRNA degradation factors
bll0779 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
PCB_OB
DUF7357
Motif
Other DBs
NCBI-ProteinID:
BAC46044
UniProt:
Q89WB3
LinkDB
All DBs
Position
complement(835059..837221)
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIATVLSH
DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFVNDEYVLNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTVIDNAA
LEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKVIAHYFPEGQEPKYDKLRIAGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNIIAEVGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTESGITSLQMDIKIEGITEEIMKVALGQAKDGRIHILGEMAK
ALTNARAELGEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASEPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLASARV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKDKVAEGEKAPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcagtcgagatcgactggggcggacgccctctcaagctcgaaacc
ggcaagatcgcccgccaggccgacggcgccgtcgtcgccacctatggcgagaccgtggtg
ctcgccaccgtcgtcgcggcgaaggcgccgcgcgaaggcgtcgacttcctgccgctgacc
gtcgactaccaggagaagacctacgccgccggccgcattcccggcggctatttcaagcgt
gagggccgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgcccgatccgt
ccgctgttcgtcgacggttggcgcaacgagacccaggtgatcgccaccgtgctgtcgcac
gacatggagaacgatcccgatatcgtcgcgctggtggcctcgtcggctgcgctgaccctg
tcgggcgctcccttcaagggtccgatcggcgccgcgcgcgtcggcttcgtcaatgacgaa
tacgtgctcaacccgacgctcgacgagatggtcgacacccagctcgacctcgtcgtcgcc
ggcacggccgacgccgtgctgatggtggaatcggaagccaaggaactgaacgaagacatc
atgctcggcgcggtgatgttcggtcaccgccacttccagccggtgatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcaccgtcatcgacaatgccgcg
ctcgagaaggaaatgctcggcctcgtcgagcaggaactgcgcgccgcctacgccattccg
gtcaagcaggatcgctacgccgcggtcggcaaggtcaaggaaaaggtgatcgcccattat
ttccccgaagggcaggaaccgaaatacgacaagctgcgcatcgccggcgtgttcaaggag
ctcgaggccaagatcgttcgctggaacatcctcgacaccggcaagcgcatcgacggccgc
gactccaagaccgtgcgcaacatcatcgccgaagtcggcgtgctgccgcgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgatggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctgtcgggaacgtacaaagagacgttcctgctgcac
tacaacttccctccctattcggtcggtgagaccggccgcctcggcggcaccaagcgccgc
gagatcggccatggcaagctcgcctggcgcgcgatccacccggtgctgccgccgcatcac
gagtttccgtacacgatccgcgtggtctccgagatcaccgaatccaacggctcctcgtcg
atggcttcggtctgcggcgcctcgctcgcgctgatggacgccggcgtgccgctgaagcgg
ccgaccgcgggcatcgcaatgggcctgatcctcgaagacaagcgctttgcggttctctcc
gacatcctcggtgacgaggatcatctcggcgacatggacttcaaggtcgccggcacggaa
tcgggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaggagatcatg
aaggtcgctctcggccaggccaaggatgggcgtatccacatcctcggcgagatggccaag
gcgctgaccaacgcccgcgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
agcgacggcgaggcgatgaaggccgcgatcaagtggatcaagtcgatcgcgtccgagccc
gaagtcggccagatctatgacggcaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggctccaaggacggtctcgttcacatcagccagctcgcttcggcgcgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccgcctgtcgatgaaggtggtcgaccagaccaccggcgaggac
ctcgaggccaaggacaaggtcgccgagggcgagaaggccccgcgcgaagcggccggcgag
taa
DBGET
integrated database retrieval system
