KEGG   Bradyrhizobium diazoefficiens USDA 110: bll3587
Entry
bll3587           CDS       T00109                                 
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
  KO
K11907  type VI secretion system protein VasG
Organism
bja  Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bja00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    bll3587 (clpB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bja02044]
    bll3587 (clpB)
Secretion system [BR:bja02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   bll3587 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_16 AAA_5 AAA_22 Sigma54_activat TniB Zeta_toxin AAA_7 ATPase_2 AAA_25 nSTAND3 NACHT AAA_14 AAA_24 TsaE AAA_30 AAA_18 T2SSE NBD_SMAX1 Hpr_kinase_C SRP54 AAA_6
Other DBs
NCBI-ProteinID: BAC48852
UniProt: Q89P96
LinkDB
Position
complement(3962178..3964817)
AA seq 879 aa
MTDISIEAVTGKLNRAGYDAFLQALRHAKSAGNRNVELAHWLFHILQQERNDLSLSVDHY
KLDRARLLSDLAGVINGFRKNETDMPGVANSVIDLLDRGWHYATLFFGETQIRTGHLLVA
GLKSNDIRRTLNNLSQEFSKVNVDALAAERRAVWAGSDEETMRPMDGSGLVGAVTEGAAQ
AGPKGTTPLDRFSQDLTAKAKSGEMDPILGRDEEIRQLIDVLMRRRQNNPILTGEAGVGK
TAVVEGFAQRIAAGDVPPPLRGVRLCALDIGLMQAGASMKGEFEQRLRSVIDEVQSSPTP
IILFIDEAHTLIGAGGAAGTGDAANLLKPPLARGTLRTIAATTWAEYRQYIEKDPALTRR
FQPIQIDEPDVETCCIMLRGLLGPMEKHHGVRISDAAIVAAVNLSHRYIPSRQLPDKAVS
LLDTASARVAISQSATPALIEDARVAIAAREAERSALVSDSDLGIEDDERIVAIDNDVAA
LKDKLTNLEADWAAEQELVKDIRGIREILSEPMEGDDPAARRAELRGKFDTLESINPEKR
MVYAYVDQQSVASVVSDWTGIPVGRMMRDEIETVLKLPEILNRRVVGQSHGLTMIAKRIE
TSRAKLDNPSKPIGVFMLAGPSGVGKTETALALAETLYGGEQNMITINMSEFQEAHTVST
LKGAPPGYVGYGEGGRLTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKGTMEDGNGR
RIDFKNTLIILTTNVGTDLIMGLSRDPKYRSEPEELAKMLRPELLKVFPAALLGRIVSIP
YFPLSDEMLAGIARLQLDRIGRRLRDNHNAAFSYDDAVVEHIVSRCNDPDSGGRMIDNII
TNTLLPELSREFLSKSLAKEEVKQARVSIENDKFAYSWN
NT seq 2640 nt   +upstreamnt  +downstreamnt
gtgaccgacatcagcattgaagctgtaacgggcaagctgaaccgggccggctatgatgcc
ttcttacaggccctgcgccacgcaaagagcgccggcaatcgcaacgtcgagcttgcgcac
tggctgtttcatatcctgcagcaggaacgcaacgatctcagcctctcggtcgatcattac
aagctcgaccgcgcacgcttgttgtcggaccttgccggcgtgatcaatggctttcgtaag
aacgaaaccgacatgccgggcgtcgccaattcggtcatcgatctgctcgatcggggctgg
cattatgccacgctcttctttggcgagacccagatccgcaccggtcatctgcttgtggca
ggcctgaaatcgaacgatattcgtcgcacgctgaacaacctctcgcaggaattttccaag
gtcaacgtcgacgcactggccgcggagcgtcgcgccgtctgggccggctccgacgaggag
accatgcgaccgatggacggttcgggcctggtcggcgccgtcacggaaggcgcggcccaa
gcgggtccaaaggggacgacgccgctcgaccggttctcccaggatctcaccgccaaggcc
aaatcgggcgagatggatccgatccttggtcgggacgaagaaatccgccaactgatcgac
gtgttgatgcgtcggcggcagaacaatccaatcctcaccggcgaggctggcgtcggcaag
accgcagttgtcgagggcttcgcccagcgtatcgccgccggcgacgtgccgccaccgctc
cgcggtgtaaggctttgtgcgctcgacatcggcctgatgcaggccggtgcctccatgaag
ggcgagtttgagcagcgcttgcggtcggtgatcgacgaggtccagagctcacccaccccc
atcatcctgttcatcgatgaagcccacacactgatcggcgccggcggcgcggccggcacc
ggtgatgcagccaatctcctgaaacctccccttgcgcgtggcacgctgcgcacgatcgcc
gccaccacgtgggcagaatatcgccagtatatcgagaaagatcccgcgctcacacgacgc
ttccagccgatccagatcgatgaacccgatgtggaaacctgctgcatcatgctgcgcgga
ctcctcggtccgatggaaaagcaccacggcgttcgcatctcggatgccgcgatcgtcgca
gcggtcaacctgtcccaccgctacattccttcacggcagttacccgacaaggcggtcagc
ctgcttgataccgcctcggcgcgcgtggcgatcagccagagcgcgactccggccctgatc
gaggatgcacgcgttgcgattgccgcccgtgaagctgagcgatcagcactcgtcagcgac
agcgatcttgggattgaggacgacgagcgcatcgtagcgatcgacaacgacgtcgcagca
ttgaaggacaagctgacgaacctcgaagccgattgggccgcagagcaggagctcgtcaag
gacatccggggcattcgggagatcctgtccgaacccatggaaggcgacgatccggctgcc
aggcgcgcggagctgcgcggcaagttcgacacgcttgagagcatcaatccggaaaagcgg
atggtctatgcctatgtggaccagcagtcggtggcgtccgttgtctctgactggactggc
atcccggtcggccggatgatgcgcgacgagatcgaaaccgtgctgaaactaccggagatc
ctcaaccgccgcgtcgtcggccagtctcatgggctgacgatgatcgccaagcgaatcgag
accagccgcgccaaactggacaacccgtcgaagccgatcggcgtgttcatgctggctggt
ccatccggcgtgggcaagaccgaaaccgccctggcgcttgccgagaccctctacggcggc
gagcagaacatgatcacgatcaacatgtcggagttccaggaagcgcacaccgtctcgacc
ttgaagggagcgcctcccggctatgtcggctatggagaaggtggacgcctcaccgaggct
gtccggcgcaagccctatagcgtcatcctgctcgacgaggtcgagaaagctcatcccgac
gtccatgagatcttcttccaggtgttcgacaagggaaccatggaggacggcaacgggcgg
cggatcgacttcaagaacacgttgatcatcctgaccaccaacgtcggcaccgatctgatc
atgggcctctcgcgagatccaaagtatcgcagcgaaccggaagagctcgccaagatgctg
aggccggaattgctgaaggtgtttccggcagcgctgctcggacgcatcgtctcgataccg
tacttcccgctatccgacgaaatgctcgccgggatcgctcggttgcagctcgaccggatc
ggacgacgcctccgtgacaaccataacgcggcattcagctacgatgacgcggtcgtggag
cacattgtgtcacgttgcaacgacccggactctggcgggcgaatgattgacaacatcatc
accaacaccctgctcccggagctgtcacgcgaattcctcagcaagtcgcttgccaaggaa
gaagtcaagcaagcgcgggtctcgatcgagaacgacaagttcgcatattcgtggaattga

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