Bradyrhizobium diazoefficiens USDA 110: bll5061
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Entry
bll5061 CDS
T00109
Symbol
rnc
Name
(GenBank) RNase III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
bll5061 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bja03019
]
bll5061 (rnc)
03009 Ribosome biogenesis [BR:
bja03009
]
bll5061 (rnc)
03036 Chromosome and associated proteins [BR:
bja03036
]
bll5061 (rnc)
Enzymes [BR:
bja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
bll5061 (rnc)
Messenger RNA biogenesis [BR:
bja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bll5061 (rnc)
Ribosome biogenesis [BR:
bja03009
]
Eukaryotic type
90S particles
RNase
bll5061 (rnc)
Prokaryotic type
rRNA processing factors
bll5061 (rnc)
Chromosome and associated proteins [BR:
bja03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
bll5061 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BAC50326
UniProt:
O69161
LinkDB
All DBs
Position
complement(5615500..5616321)
Genome browser
AA seq
273 aa
AA seq
DB search
MKDEAKDITTQPTEAQAAPDGEAVTKTPAKKKRARSSKAKGTDANAALEARIGHSFADPN
LLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAFPNADEGELSKRLAEL
VRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVIGAIFLDGGHAAAAEF
VKRNWTERMHKPRRPLRDPKTVLQEWAQGKGLPTPVYREVERTGPHHDPQFRVAVDLPGL
APAEGIGGSKRAAEKVAASVMIEREGVGGGNDG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgaagccaaggacatcacgacccagccgaccgaagcgcaagccgctcctgac
ggcgaagctgtgaccaagacgcctgccaagaagaagcgggcgcggagcagcaaggccaag
ggcacggatgcgaacgcggcgcttgaggcgcgcatcggccacagcttcgccgacccgaac
ctgctgatgcaggggatcacgcatgtctcggcgctgaaatccgggcgcaagcgcggcgac
agctatcagcggctggaattcctcggcgaccacgtgctcgggctcgtcgtgtccgacatg
ctctaccacgccttcccgaacgccgacgaaggcgagctgtccaagcgccttgccgaactc
gtgcgcaaggagagctgtgccgacgtcgccaagtcgctcgggctgctcgacgacatcaag
ctcggttcggtcggccccagcgccgacgcccgcctgcgcaagagcgtgctcggcgacatc
tgcgaagccgtgatcggcgccatcttcctcgacggcggccatgcggcggcggccgaattc
gtcaagcgcaactggaccgagcgcatgcacaagccgcggcgtccgttgcgcgatcccaag
accgtgctccaggaatgggcgcaggggaagggcctgccgacgcctgtttaccgcgaggtc
gagcgcaccggcccgcatcacgatccgcagttccgcgtcgcggtggacctgccgggactg
gcgccggcggaaggtatcggcggcagcaagcgcgcggcagagaaggtggcggcctcggtg
atgatcgaacgtgaaggtgttggcggcggcaatgacggttga
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integrated database retrieval system
