Bradyrhizobium diazoefficiens USDA 110: bll5928
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Entry
bll5928 CDS
T00109
Symbol
rfaD
Name
(GenBank) ORF_ID:bll5928; probable ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00541
Biosynthesis of various nucleotide sugars
bja01100
Metabolic pathways
bja01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
bll5928 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bja01005
]
bll5928 (rfaD)
Enzymes [BR:
bja01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
bll5928 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bja01005
]
Core region
bll5928 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BAC51193
UniProt:
Q89HR2
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All DBs
Position
complement(6520239..6521219)
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AA seq
326 aa
AA seq
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MLLVTGGAGFIGSNVVAALNDAGRSDVAVCDFLGTDGKWRNLAKRQLVDIAPPAELPDWL
NGRRLDAVIHLGAISATTATDGDLVFETNFRLSMRLLDWCTANAVPLIYASSAATYGDGE
AGFDDDASLPALKKLRPMNLYGWSKHMFDLAVAERVARGEKLPPQWAGLKFFNVFGPNEY
HKGSMMSVLARRFDDVKAGRVVQLFKSHREGIADGDQRRDFIYVDDVVRVIMWLLATPSV
SGLFNVGTGKARSFKDLMLAAYAALGARPNIEYIDMPEQIRNSYQYFTQSEVDRLCRAGY
NGGFTTLEDAVKAYVGDYLDRPDRFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggtgaccggcggagccggttttatcgggtcgaatgtcgtggctgcgttgaac
gacgccggccgcagcgacgtcgccgtctgtgatttcctcggcaccgacggcaagtggcgc
aatctcgccaagcgccagcttgtggatatcgcccccccggccgagctgcccgactggctg
aacggccgcaggctcgacgccgtgatccatctcggggcgatttccgcgaccaccgcgacc
gacggcgacctcgtgttcgaaaccaatttccgcctctccatgcgcctgctcgactggtgc
acggcgaatgcggtgccgctgatctacgcctcctcggccgccacctatggcgacggcgag
gcaggctttgacgacgatgcgtcgctgcccgcgttgaagaaactccggccgatgaacctc
tacggctggagcaagcatatgttcgatctcgccgtggccgaacgggtcgcgcgcggcgag
aagctcccgccgcaatgggccggcctgaaattcttcaacgtgttcggccccaacgagtac
cacaagggctcgatgatgagcgtgctggcgcggcgcttcgacgacgtcaaggcgggccgc
gtcgtgcaattgttcaagtcgcatcgcgaaggcattgccgacggcgaccagcgtcgcgat
ttcatctatgtcgacgacgtcgtgcgcgtcatcatgtggctgctggcaacgccctcggtg
tccgggctgttcaacgtcggcaccggcaaggcgcgcagcttcaaggatctgatgctggct
gcctatgcggcgctcggggcgaggcccaacatcgaatatatcgacatgcccgaacagatc
cgcaacagctatcaatacttcacccagagcgaggtcgatcgcctctgccgcgccggctat
aacggcggcttcacgacgctcgaggatgcggtgaaggcctatgtcggggattatctcgac
cggcccgaccgcttccgctga
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