Bradyrhizobium diazoefficiens USDA 110: bll8116
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Entry
bll8116 CDS
T00109
Symbol
bll8116
Name
(GenBank) DNA polymerase III tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03030
DNA replication
bja03430
Mismatch repair
bja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bll8116 (bll8116)
03430 Mismatch repair
bll8116 (bll8116)
03440 Homologous recombination
bll8116 (bll8116)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bja03032
]
bll8116 (bll8116)
03400 DNA repair and recombination proteins [BR:
bja03400
]
bll8116 (bll8116)
Enzymes [BR:
bja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bll8116 (bll8116)
DNA replication proteins [BR:
bja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bll8116 (bll8116)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bll8116 (bll8116)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_30
AAA_16
AAA_5
AAA_18
AAA_14
AAA_assoc_2
AAA_24
TsaE
AAA_19
AAA_33
TIP49
nSTAND3
RCF1-5-like_lid
SRP54
TraI_hel_assoc_N
Rad17
AAA_2
SKI
AAA_28
RNA_helicase
Zeta_toxin
ABC_tran
CbiA
Motif
Other DBs
NCBI-ProteinID:
BAC53381
UniProt:
Q89BN2
LinkDB
All DBs
Position
complement(8907108..8908949)
Genome browser
AA seq
613 aa
AA seq
DB search
MTDAGAPPNSDSASQAGNAPYRVLARKYRPSSFDDLIGQEAVVRTVSNAFETGRIPQAWI
LTGVRGVGKTTTARILARALNYEMPDGSVKGPTIHMPNLGVHCQAIMESRHMDVLEMDAA
SHTGVDDVRQINDSVRYAPASARYKVYIIDEVHMLSTAAFNAFLKTLEEPPEHAKFVFAT
TEIRKVPVTVLSRCQRFDLRRVEADVLMKHLASIAAKESVEIEPEALGIIARAAEGSVRD
SLSLLDQAIAHAAGTVKADAVRQMLGLADRTRVIDLFDSLARGDIAAAFKEFRDQYDVGA
DPIVVLSDLAEFVNFVTRVKIVPATADNVAYGETERVRARDFASKISMRVLSRMWQMLLK
GITEVQAATRPAAAAEMVLVRIAYVADLPTPDEAIRMLEQNGGGSPVVSGGSAARSAPAA
PVASAAPAVSAAPMRAPTSSPSSFGGGAARPQMAAPAPDPQAAAPQLRITSFTQLVALAG
QKRDIMTKAALEADMRLVRFEEGRLEVALEPNASRTMITELARKFELWTGRRWTVIVSNE
QGQPTLRSVNQAAKQEHARTAEADPRVQEVLSRFPGSKVVEVRRLAPETPESNINADYGS
DDPPDGSDTDDDL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgctggcgcccctcctaactccgatagcgccagccaggctggcaacgcgccc
taccgggtgctggcgcgcaaataccgcccctcctcgttcgacgacctgatcggccaggag
gccgtggtccgcaccgtctccaatgcattcgagaccgggcgtatcccgcaggcctggatc
ctcaccggcgtccgcggcgtcggcaagaccaccaccgcgcgaattcttgcccgtgcgctc
aactacgagatgccggacggctcagtgaagggcccgaccatccacatgccgaacttgggc
gtgcattgccaggcgatcatggaaagccggcacatggacgtgctggagatggacgcggcc
tcgcatacaggcgtcgacgacgtccgccagatcaatgacagcgtgcgctacgcgccggcc
agtgcccgctacaaggtctacatcatcgacgaagtccacatgctgtcgacggcggcgttc
aacgccttcctgaagacgctggaggagccgccggagcacgccaagttcgtgttcgcgacg
acggagatccgcaaggttccggtcaccgtgctgtcgcgctgccagcgtttcgacctgcgc
cgggtcgaggccgacgtgctgatgaagcacctcgccagcatcgcggcgaaggaaagcgtc
gagatcgagcccgaggcgctcggcatcatcgcgcgtgccgcggaaggctccgtgcgcgat
tcgctgtcgctgctcgaccaggcgatcgcgcatgcggcaggcacggtgaaagccgatgcc
gtcaggcagatgctgggcctcgccgaccgaacgcgtgtgatcgacctgttcgattcgctg
gcgcgtggcgacatcgccgccgcgttcaaggagttccgcgaccagtacgacgtcggcgcc
gatccgatcgtcgtgctctcggacctcgccgagttcgtcaatttcgtcacccgcgtgaag
atcgtgccggcgaccgccgacaatgtcgcctatggcgagaccgagcgggtgcgcgcgcgg
gatttcgcgtcaaaaatctcgatgcgcgtgctgtcgcggatgtggcagatgctgctcaag
ggcatcaccgaggtgcaggccgcgacgcgccccgccgccgccgccgagatggtgctggtg
cgcatcgcctatgtcgccgacctgccgacgccggacgaggcgatccggatgctggagcag
aacggcggcggctcgccggtcgtgagcggcggcagtgcggcgcgcagcgcgccggcggcg
ccggttgcctctgctgcgcctgccgtctcggctgcgcccatgcgcgcgccgacctcatcg
ccgtcgtcgttcggcggcggtgctgcccggccgcagatggcggcgcccgcgccggatccg
caagccgcggcaccccagctgcgcatcacgagcttcacccagctcgtcgcgcttgccggc
cagaagcgcgacatcatgaccaaggccgcgctcgaagccgacatgcgcctcgtccgtttc
gaggagggccggctggaagtcgcgctcgagcccaatgcctccaggaccatgatcaccgag
ctcgcgcgcaagttcgaactctggaccggccggcgctggaccgtgatcgtctccaacgag
cagggccagccgacgctgcgttcggtgaaccaggccgccaagcaggagcatgcgcgtacc
gcggaggccgatccgcgcgtgcaggaggtgctgtcgcgcttccccggatcgaaggtcgtc
gaggtccgcaggcttgcccccgagacgccggaatccaatattaacgccgactatggcagt
gacgatccgcccgacggttccgataccgacgacgatctctga
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