Bradyrhizobium diazoefficiens USDA 110: bll8229
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Entry
bll8229 CDS
T00109
Symbol
bll8229
Name
(GenBank) ORF_ID:bll8229; hypothetical protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00470
D-Amino acid metabolism
bja00550
Peptidoglycan biosynthesis
bja01100
Metabolic pathways
bja01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
bll8229 (bll8229)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
bll8229 (bll8229)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
bll8229 (bll8229)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bja01011
]
bll8229 (bll8229)
Enzymes [BR:
bja01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
bll8229 (bll8229)
Peptidoglycan biosynthesis and degradation proteins [BR:
bja01011
]
Precursor biosynthesis
Amino acid ligase
bll8229 (bll8229)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
GARS_A
RimK
TTL
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
BAC53494
UniProt:
Q89BC7
LinkDB
All DBs
Position
complement(9019866..9020912)
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AA seq
348 aa
AA seq
DB search
MRVAVVWNDDHRGVINHFGQPCPEKYGRKTVESVVAALQEGNHDTLLCEGDKGLLATLER
FMPPDSQARPSGIVFNMAYGIQGECRYTHVPAMLEMAGVPYTGSSPLGHALALDKAITKQ
LIRDCGVPTPNFRVMRRGTESTGDLCFPLVVKPRHESTSFGLQLVYEPAQLRQAVEVIVT
QYAQDALVEEYIEGREICVALLGNGELEALPLVEQDFGERETRLITWEDKMHMAVVEPQK
ICPAQVGSNLATILRDISVATFRACRCRDYARVDIRIDRSGHPFVLEINSMAALGIGASY
VLAAKAAGYTFSSLVNGILDVAHARYFGTGISQAEQPSNRERIYYAAG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtagccgtcgtgtggaacgatgatcataggggcgtgatcaaccacttcggtcaa
ccttgcccggagaaatacggccgcaagacggtcgaaagcgtggtggcggcactgcaagag
ggtaaccacgacacgctgctgtgcgaaggtgataaaggactgctcgcgacgcttgagcgg
ttcatgccacccgattcgcaagcccgcccttcagggatcgttttcaacatggcgtacgga
attcagggcgagtgccgctacacgcacgttccggccatgctcgagatggctggcgttccg
tacaccggctccagcccgctcgggcacgcactggcgctcgacaaggccattaccaaacag
ctcatccgcgattgcggcgtgccgacgccgaactttcgtgtgatgcgtaggggcaccgag
agtaccggcgatctgtgcttcccgttggtagtaaagccgcgtcatgaatccacgagcttc
ggattgcagctcgtatatgagcccgcccagttgagacaggccgtagaagtgatcgtcacg
caatatgcgcaggatgcactcgtagaagaatacatcgaagggcgggagatctgcgttgcc
ctgctgggaaacggagagcttgaggcgttgcctctggtggagcaggacttcggcgagcgc
gagacgcgtcttatcacttgggaagacaagatgcacatggcggtcgtggagccccagaag
atttgcccggcgcaggtcgggagcaatctcgcgacaatactgcgggatatttcggttgcg
accttccgcgcctgccgctgccgggattacgcccgcgtcgacatccggatcgaccgctcc
gggcacccctttgtcctggagatcaactcgatggccgcactcggtatcggcgcgtcttat
gtcctggccgcgaaagccgccgggtacaccttctcgagtttggtcaacggtatcctcgac
gtcgcccacgcgcggtatttcggaactggcatttcccaggccgaacaaccgtcaaatcgc
gagcggatttattatgccgctgggtag
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