Bradyrhizobium diazoefficiens USDA 110: blr0446
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Entry
blr0446 CDS
T00109
Symbol
xerC
Name
(GenBank) ORF_ID:blr0446; probable site-specific integrase/recombinase
KO
K03733
integrase/recombinase XerC
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bja03036
]
blr0446 (xerC)
Chromosome and associated proteins [BR:
bja03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
blr0446 (xerC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
BAC45711
UniProt:
Q89X68
LinkDB
All DBs
Position
482206..483171
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AA seq
321 aa
AA seq
DB search
MSKAAAPQIELASADPSIAQEMTRWLSHLGAERRLSPKTLEAYGRDLRQCLDFLCNHWGE
RVTLKRFAALEATDVRAFMAMRRADDIAGRSLMRALAGLRSFGRFLEREGKGKVGALSAI
RAPKVAKSLPKPLPMASAKRLADADERAGEERETWILARDAAVMALLYGSGLRISEALGL
KRREVPKPGEGDVLVVTGKGNKTRMVPVLQNVLALVQEYVSMCPYPLPAEGPIFVGARGG
PLSPRIIQLAMERLRGALGLPDSATPHALRHSFATHLLSRGGDLRAIQELLGHSSLSTTQ
IYTGIDSERLLEVYASAHPRR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcggccgccccacaaatcgagctcgccagcgccgatccctcgatcgcgcag
gagatgacgcgctggctgtcgcatctcggcgccgagcggcggctgtcgccgaagacgctg
gaggcctatggccgcgacttgcggcagtgcctggatttcctctgcaatcactggggcgaa
cgcgtcacgctcaagcgcttcgccgcgctggaggccaccgacgtgcgcgccttcatggcg
atgcgccgggccgacgacattgccggtcgctcgctgatgcgcgcgctggcgggcctgcgc
tcgttcggccgcttcctcgaacgcgagggcaagggcaaggtcggcgcgctctccgcgatc
cgcgcgccgaaagtcgcaaagagcctgccgaagccgctgccgatggcgtcggccaaacgt
cttgcggacgccgacgagcgcgccggcgaggaacgcgagacctggattctggcgcgcgat
gcggcggtgatggcgctgctgtatggttccggcctgcgcatctccgaagcgctcggactg
aagcgccgcgaggtgccgaagccgggcgaaggcgacgtgctcgtcgtcacaggcaaaggc
aacaagacccgcatggtgccggtgctgcagaacgtgctggcgctggtgcaggaatatgtt
tcgatgtgcccctatccgctgccggcggaagggccgatcttcgtcggcgcgcgcggcggt
cccttgagcccgcgcatcatccagctcgcgatggagcggctgcgcggcgcgctcggcctg
cccgacagcgcgacgccgcacgcgctgcgccattccttcgccacgcatcttctgtcgcgc
ggcggcgacctgcgcgcgatccaggaactgctcggccattcctcgctctcgaccacgcag
atctacaccggcatcgattccgagcggctgctggaagtctatgccagcgcgcatccgcgg
cggtga
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