Bradyrhizobium diazoefficiens USDA 110: blr0640
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Entry
blr0640 CDS
T00109
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03030
DNA replication
bja03430
Mismatch repair
bja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
blr0640 (dnaQ)
03430 Mismatch repair
blr0640 (dnaQ)
03440 Homologous recombination
blr0640 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bja03032
]
blr0640 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bja03400
]
blr0640 (dnaQ)
Enzymes [BR:
bja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
blr0640 (dnaQ)
DNA replication proteins [BR:
bja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
blr0640 (dnaQ)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
blr0640 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
MethyTransf_Reg
Motif
Other DBs
NCBI-ProteinID:
BAC45905
UniProt:
Q89WN8
LinkDB
All DBs
Position
687254..687973
Genome browser
AA seq
239 aa
AA seq
DB search
MREIVLDTETTGLDPLRGDRLVEIGCVEMFNRMPTGQTYHVYINPERDMPAEAFAVHGLS
AEFLSTKPVFHEVADAFLEFIGDAPLVIHNASFDISFINAELDRIKRAAIPREQLVDTLL
LARRKHPGVSNRLDDLCSRYAIDNSRRTKHGALLDAELLAEVYVDLVGARQSQLLLASEA
EEIRINAAGDTPRRQRPTPLAPRISDAEREAHRAFIATLGDKAIWNEFLPAPVTVNPAG
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatcgttctcgacaccgaaaccaccggcctcgatccgctccgcggcgatcgc
ctggtcgaaatcggctgtgtcgagatgttcaaccgcatgccgacggggcagacgtatcac
gtctacatcaatcccgaacgggacatgccggcggaagcctttgcggtgcacgggctgtcg
gccgaatttttgtcgaccaagccggtgttccacgaggtcgccgatgcgttcctggagttc
atcggcgatgcgccgctggtgatccacaacgcctcgttcgacatcagcttcatcaatgcc
gagctcgaccggatcaagcgcgccgcgataccgcgcgagcagctggtggacacgctgctg
ctggcccggcgcaagcatccgggcgtgtccaaccggctcgacgatctctgctcgcgctat
gcgatcgacaattcccgccgcaccaagcacggcgcgctgctcgacgccgagcttctggcc
gaggtctatgtcgatctggtcggggcgaggcagtcgcagctgctgctggcttcggaagcc
gaggaaattcgcatcaatgcggctggcgatacgccgcggcggcagcgaccgacgccgctt
gcgccgcggatttccgacgccgagcgcgaggcccacagggccttcatcgcaacgctcggc
gacaaggcgatctggaacgagtttttgcccgctccagttaccgtcaatccggctggttag
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