Bradyrhizobium diazoefficiens USDA 110: blr0723
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Entry
blr0723 CDS
T00109
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 subunit
KO
K03092
RNA polymerase sigma-54 factor
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja02020
Two-component system
bja02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
blr0723 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
blr0723 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bja03021
]
blr0723 (rpoN2)
Transcription machinery [BR:
bja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
blr0723 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BAC45988
UniProt:
P30333
LinkDB
All DBs
Position
771986..773599
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AA seq
537 aa
AA seq
DB search
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLTTFVEEELERNPLLERANDEASGGE
APAEAGQFSDSDGGHNDEPGGGPGEAFEPGQEEWMSKDLGTRAEIEQTLDTGLDNVFSEE
PAEAAARNAQDAAPTTYTEWGGGASGDEDYNLEAFVAAEVTLGDHLAEQLSVAFTAPAQR
MIGQYLIDLVDEAGYLPPDLGQAAERLGASQQEVEDVLAVLQKFDPPGVCARNLSECLAI
QLRELDRYDPAMQALVEHLDLLAKRDIAGLRKVCGVDDEDIADMIGEIRRLNPKPGMKFG
AARLQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYSELSKKIGKDGDKSYFTDAL
QNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQMHESTVSR
VTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDSEAPAAILSDDTI
VERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSALGNVLSTAMSDRSRNPEPA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacgcagagattagagttccggcaatcgcagtcgctggtcatgacgccgcag
ctgatgcaggcgatcaagctgctgcaattgtccaatctcgatctcacgaccttcgtggaa
gaggaactcgagcgtaatccgctgctggagcgggccaatgacgaggcctccggcggcgaa
gccccggccgaggccggccagttcagcgattccgacggcggccacaacgacgagccgggc
gggggtccgggcgaggcgttcgagccgggccaggaagaatggatgagcaaggatctcggc
acccgcgccgagatcgagcagaccctggacacgggcctggacaacgtcttctccgaggag
ccggccgaggccgcggcgcgcaacgcccaggacgccgcgccgaccacctacacggaatgg
ggcggcggcgcctccggcgacgaggactacaatctcgaggcgttcgtcgccgccgaggtc
acgctcggcgatcatctcgccgagcagctctcggtcgcattcaccgcacccgcacagcgc
atgatcggccagtacctgatcgatctcgtcgacgaggccggctatctgccgccggatctc
ggccaggccgccgagcgacttggcgcctcgcagcaggaggtcgaggacgtcctggccgtg
ctgcaaaaattcgatccgcccggcgtctgcgcgcgcaatttgagcgaatgcctggcgatc
cagctccgcgagctcgaccgctacgacccggcgatgcaggcgctggtcgagcatctcgat
ctcctcgccaagcgcgacatcgcgggcttgcgcaaggtttgcggcgtcgacgacgaggac
atcgccgacatgatcggcgagatccgccgtctcaaccccaagcccggcatgaaattcggc
gcggcgcggctccagaccatggtgcccgatgtctatgtccgtccgggtccggatggcggc
tggcatgtcgagctcaacagcgacaccttgccgcgcgtgctggtcaaccagacctactat
tccgagctgtcgaagaagatcggcaaggacggcgacaagtcctatttcaccgacgcgctc
cagaacgcgacctggctcgttcgcgcgctcgaccagcgcgcccgcaccatcctgaaagtt
gcaaccgagatcgtgcgccagcaggacggcttcttcacccatggcgtcgcgcatttgcgg
ccgctgaacctgaaggccgtcgccgacgccatccagatgcatgaatccacggtgtcgcgc
gtcactgccaacaaatacatggcgaccaaccgcggcacgttcgagctgaaatatttcttc
accgcctcgatcgcctcggccgacggcggcgaggcgcattcggccgaagccgtgcgccac
cacatcaagcagctgatcgattcggaagcgccggccgcgatcctgtcggatgataccatc
gtggaacggttacgcgcttcgggcattgatattgcccgccgcacggtcgcgaagtaccgc
gaagccatgcgcattccttcctcggtgcaacgtcgccgcgacaagcagagcgctcttggt
aacgtcctctctaccgcaatgtccgatcgctcccgcaaccccgagccggcctga
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