Bradyrhizobium diazoefficiens USDA 110: blr1601
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Entry
blr1601 CDS
T00109
Symbol
blr1601
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
blr1601 (blr1601)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bja02000
]
blr1601 (blr1601)
Transporters [BR:
bja02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
blr1601 (blr1601)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Aurora-A_bind
Motif
Other DBs
NCBI-ProteinID:
BAC46866
UniProt:
Q89U19
LinkDB
All DBs
Position
1757607..1759295
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AA seq
562 aa
AA seq
DB search
MSKPAAAHAAFLLKSLNRRVKSRAAVIAIAMSGLSIADPVHAEGASAGKPQSGGTIRYGH
FQEPPCLYGGWVQQWYLQRQFSDNLVARAEDGRILPWLATAWTISDDRKTYTFQIKPDVK
FTDGTSLDAQAVVDNINGWLSDSPELENPTAGPYLRGIFESAAVADPLTFKITLKTPFEP
LLNVFAQSSQGILSPTALKRGKAVNCESPVGSGPFIVEKWNRGRNVIFRRNPNYNSAPAT
AKHQGPAYVEGIEWRFLADPTIRYGSLLTGESDVVYHIPAVNWQDANSRFKIVRHLTGGT
PLRLALFSERPPFDDVRVRQAFAYASDRRAAVQAAFLGSLPYEGNFALSQSSPEYVSELS
KSYSYDIEKANKLLDEAGWAERDANGIRSKNGKALIIRITYTNAFSPPDGDQVLQIIQQQ
AKAAGFDVRLQPTNQADFWAGKNLGPNDYEVVPLYWVAPGAEIYRISYKPDLNGVRNPFN
PSRYQDLPLWDIIQKAEQAGDKAQRTALYQQAERRIIENAPSLSYTVLDVTLALADNVKD
IWLDSGSVGEPVFSDAYFTDKK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggctgccgctcatgcggcgtttcttctcaaaagtctgaatcgtcgtgtg
aagtctcgcgccgcagtcatcgccatcgcgatgtctggcctttcgattgcggatccggtg
cacgcggagggcgcttcggctggcaagccgcaatcgggtgggactatccggtacggacac
ttccaggagccgccgtgcctctatggtggttgggtgcagcagtggtaccttcagcgtcaa
ttcagcgacaatctggtcgccagggctgaagacggaaggatcctgccttggcttgcgacc
gcctggaccatctcggatgaccgcaaaacttacaccttccagatcaagcccgatgtcaaa
ttcacggacgggacgtctctggacgcccaggcggtcgtcgataatatcaatggatggctg
agcgacagtccggagctcgagaaccccacagccggtccttatctcaggggcatcttcgag
tccgcggcggttgccgacccgctgacgttcaaaatcacgttgaagacgccgttcgagccg
ctgctgaatgtctttgcgcagtcctcgcaaggcatcttgtcgccgacggcgcttaagcgt
ggcaaggccgtgaactgcgaaagcccagttggttcgggtccgttcatcgtagagaaatgg
aaccgcggcaggaacgtcatattccgtcgaaacccaaactataattcggcgccggccact
gccaagcatcaaggcccagcctatgtcgaaggaattgagtggcgttttctcgctgacccc
acgatacgctacggctcacttctgaccggcgaatccgacgttgtctatcatatccctgcc
gtcaactggcaggatgccaattcccggttcaagatcgtgcgccacctcacgggtggaacg
ccgcttcggcttgcgttgttctccgagagaccgccgttcgacgacgtgcgtgtccggcag
gcttttgcttacgcctcggaccgacgtgctgccgtgcaagcggcgtttcttggctcactg
ccctatgagggcaatttcgctttgagccaaagctcgccggaatatgtcagcgagctctca
aaatcctattcctatgacatcgagaaggcgaacaagctgctcgatgaggctggctgggcg
gagcgcgatgcaaacggcattcgcagcaagaacggcaaagcgctgatcatacgcatcacc
tacaccaatgccttttcgcctcccgacggcgatcaggtcctgcagatcatccagcagcaa
gcgaaggccgcagggttcgacgtgcggctccagccgaccaaccaggctgatttctgggca
ggaaagaatcttggtccaaatgactatgaggtcgttccactgtattgggttgcgcctggc
gccgagatctatcgtatttcgtacaagcctgacctgaatggtgtccgcaatcccttcaat
ccatcccgctatcaggatctgcccctgtgggacatcattcagaaggctgaacaggctggt
gacaaggcgcaacgcaccgcgctttatcagcaggcggaacggcggattatcgagaacgcg
ccgtccctgagctacacggttttggacgtcaccctcgctttagccgataatgtgaaagac
atctggctcgacagcgggtcggtgggcgagcccgttttctcggacgcatatttcaccgac
aagaaatga
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