Bradyrhizobium diazoefficiens USDA 110: blr1993
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Entry
blr1993 CDS
T00109
Symbol
blr1993
Name
(GenBank) ORF_ID:blr1993; probable polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00040
Pentose and glucuronate interconversions
bja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
blr1993 (blr1993)
Enzymes [BR:
bja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
blr1993 (blr1993)
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GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-ProteinID:
BAC47258
UniProt:
H7C6S1
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Position
2150474..2152006
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AA seq
510 aa
AA seq
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MSRLTLRSCWIFVLSQNASSFSRIGKVLLRDLKSRRLLRRINVILCAPVTHAATRSSQRS
IPEKARDNDARDKSTSRSMTKRFRNWALLSILASMVVGPAAKAQDRRTIAEPVAPDTVCD
RPVPSGKNDTVSLQEAIEHCPDGAAVYLGRGEFHSGPLEMKSGVTLWVGRGATLIAIPEP
AAYDKGLGQCGRIAEKGDGCRPFISFSKTRGGGIYGEGIIDGQGGALIGGGAETWWQLAR
RAQAQGGNQNAPRLIQVDHAQDITFSGVTLRNAANFHVAMNRVEGATFWALTIDSPADAR
NTDGIDLGASQDVTITHSWIRTGDDNVAIKAGDNGSSSHISIIDNYFGWGHGMSIGSEVN
SGARDILVRNLTLDGTTSGLRIKSDVGRGGLVENVTYEYVCLRGNRWPLAFDAKYDPRAQ
GTRIPVYRQIVLRHVHGDTGVLLMRGIDERHALDVTLEDVRFANSATWQLEHANVSANHS
DVWPPLPGRATQPPLRGSEVCSKAFRDGNR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaggctgacgttacgaagttgttggattttcgtactatcgcaaaacgcttcatct
ttttcgcgcataggcaaggtgctgctgcgcgatctcaagtccaggcgtctactgcgtcgg
ataaatgtcatcttgtgcgcgccagtgacgcacgcggcgactcgatcaagccagcgctca
ataccagaaaaggcacgcgacaatgatgcgcgtgacaaaagcacgagcaggtcaatgaca
aagcgttttcgcaactgggccctattgtccatactcgcctccatggttgtcggccccgcc
gcaaaagcgcaagaccgccggactatcgccgaacctgttgcacctgatacggtctgtgat
cgccctgtgccttccggcaagaacgatacagttagcctacaggaggccattgaacattgc
cccgatggcgctgcagtttatctcgggcgcggcgagtttcactcaggtccactcgagatg
aaatcgggcgtgaccttatgggtcggacgcggtgcgacactgatcgccatccccgaacct
gccgcttacgacaagggcctcggacaatgtggtcgcattgcggaaaagggcgacggttgc
cggccattcatcagcttttctaaaacgcgcggcggcggtatctacggagagggcatcatc
gatggtcagggcggcgcgctgatcggcggcggcgcggaaacctggtggcagctagcccgc
cgcgcccaagcccagggcggcaatcagaacgccccacgcttgatccaggtcgatcatgcg
caggatatcacgttctctggtgtcaccttgcgcaacgctgccaattttcatgtcgcgatg
aaccgggttgaaggtgccacgttttgggccctcacgatcgattcgccggcggatgcccgc
aataccgatggcatcgatcttggcgccagtcaggatgtgaccatcacccacagctggatc
cgtacgggtgacgacaacgtcgcaatcaaggccggcgacaatggttcaagcagccatatc
tcgatcattgataattatttcggctgggggcatggcatgtcgatcggcagcgaggtgaat
tccggggccagagacatattggtgcgtaatctgacactggatggtacgacgtcgggcctg
cgcatcaagagcgatgttggtcgaggcggtctggtcgagaacgtgacttatgagtacgtg
tgcctgaggggcaaccggtggccgctggctttcgatgcaaaatatgatccgcgcgctcaa
ggcacgaggattccggtctatcggcaaatcgttctccgtcatgtgcatggcgacactggt
gtgctgctgatgcgcggcatagacgagcggcatgccctggacgtgacactcgaagatgtt
cgatttgccaattccgcgacttggcaacttgaacatgcgaacgtcagcgcaaatcactct
gacgtatggcccccgctgcccggacgagctacacaaccgccgctgcgcggatcggaggta
tgttccaaggcattccgcgacggcaatcggtaa
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