Bradyrhizobium diazoefficiens USDA 110: blr2585
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Entry
blr2585 CDS
T00109
Symbol
cbbL
Name
(GenBank) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00630
Glyoxylate and dicarboxylate metabolism
bja00710
Carbon fixation by Calvin cycle
bja01100
Metabolic pathways
bja01110
Biosynthesis of secondary metabolites
bja01120
Microbial metabolism in diverse environments
bja01200
Carbon metabolism
Module
bja_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
blr2585 (cbbL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
blr2585 (cbbL)
Enzymes [BR:
bja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
blr2585 (cbbL)
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
BAC47850
UniProt:
Q9ZI34
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All DBs
Position
2828304..2829764
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AA seq
486 aa
AA seq
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MNAHTGTVRGKERYRSGVMEYKRMGYWEPDYTPKDTDVIALFRVTPQEGVDPIEASAAVA
GESSTATWTVVWTDRLTAAEKYRAKCYRVDPVPGTPGSYFAYIAYDLDLFEPGSIANLSA
SIIGNVFGFKPLKALRLEDMRFPVAYVKTFQGPATGIVVERERLDKFGRPLLGATVKPKL
GLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRDRFLYCIEAVNRAQAASGEVKGT
YLNITAGTMEDMYERAEFAKELGSCIVMIDLVIGYTAIQSMAKWARRNDMILHLHRAGHS
TYTRQKSHGVSFRVIAKWMRLAGVDHIHAGTVVGKLEGDPNTTRGYYDVCREDFNPTKLE
HGLFFDQSWASLNKMMPVASGGIHAGQMHQLLDLLGEDVVLQFGGGTIGHPMGIAAGAIA
NRVALEAMILARNEGRDYVHEGPEILAKAAQTCTPLKSALEVWKDVTFNYQSTDTPDFVP
TALETV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacataccggcacggttcgcggcaaggagcgttatcgctcgggcgtcatggaa
tacaagcgcatgggctattgggagcccgactacacgccaaaggacaccgacgtcatcgcg
ctgttccgcgtcacgcctcaggagggcgtcgatccgatcgaggcgtccgctgcggttgcc
ggcgagtcctcgaccgcgacctggacggtggtgtggacagatcgcctgacggccgcggag
aaatatcgcgcgaaatgctatcgcgtcgatccggtgccgggcacgccgggctcgtatttc
gcctacatcgcctacgacctcgacctgttcgagccgggctcgatcgccaacctctcggcc
tcgatcatcggcaacgtgttcggcttcaagccgttgaaggcgctgcggctcgaggacatg
cgattccccgtcgcctatgtgaagacgttccaggggccggcgaccggcatcgtggtcgag
cgcgagcgactcgacaagttcggccggccgctgctcggcgcaaccgtgaagccgaagctc
gggctttcggggcgtaactatggccgcgtggtctacgaggcgctgaagggcgggctcgac
ttcaccaaggacgacgagaacatcaactcgcagcccttcatgcattggcgcgaccgcttc
ctctattgcattgaggccgtgaaccgcgcacaggcggcgtcgggcgaggtgaagggcacg
tacctcaacatcaccgcgggaacgatggaggacatgtacgagcgtgcggagttcgcgaag
gagctcggatcctgcatcgtcatgatcgacctcgtgatcggctacaccgcgatccagtcg
atggccaagtgggcccggcgcaatgacatgatcctgcatctgcatcgcgccggccactcg
acctatacgcggcagaagagccatggcgtgtcgttccgtgtcatcgccaaatggatgcgg
ctcgccggggtagatcacatccatgccggcacggtggtcggcaagctcgaaggcgatccc
aacaccacgcgtggctactacgatgtctgccgcgaggatttcaatccgaccaagctcgag
cacggcctgttcttcgaccagtcctgggcgagcctgaacaagatgatgccggtggcctcc
ggcggcatccatgccggccagatgcaccagctgctcgatctgttgggcgaggacgtcgtg
ctgcaattcggcggtggcacgatcggccatcccatggggatcgcggccggcgcgatcgcc
aaccgcgtggcgctggaagcgatgatcctcgcccgcaacgaggggcgcgactacgtccac
gaaggcccggagatcctggccaaggcggcccagacctgcacgccgctcaagtccgcgctc
gaggtctggaaggacgtgaccttcaactaccagtccaccgacacgccggacttcgtgcca
acggcgctggaaaccgtttga
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