Bradyrhizobium diazoefficiens USDA 110: blr2616
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Entry
blr2616 CDS
T00109
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00071
Fatty acid degradation
bja00310
Lysine degradation
bja00362
Benzoate degradation
bja00380
Tryptophan metabolism
bja01100
Metabolic pathways
bja01110
Biosynthesis of secondary metabolites
bja01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
blr2616 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
blr2616 (gcdH)
00380 Tryptophan metabolism
blr2616 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
blr2616 (gcdH)
Enzymes [BR:
bja01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
blr2616 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
BAC47881
UniProt:
Q89RZ6
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Position
2863901..2865115
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AA seq
404 aa
AA seq
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MSVRPQTKDKPAAASFQWDDPFLLDEQLTEDERMVRDTARAYAQDKLLPRITKAYLEETT
DREIFNEMGELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP
IYAYGDENQRKKYLPKLASGEWVGCFGLTEPDAGSDPAGMKTRAEKVSDGYRLTGSKMWI
SNAPIADVFVVWAKSAAHDNQIRGFVLEKGMKGLSAPKIGGKLSLRASITGEVVMDGVVV
PEDALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFGKPLAATQL
VQKKLADMETEIALGLQGSLRVGRLMDEGKFAPEMISIMKRNNCGKALDIARVARDMHGG
NGISIEYHVMRHVHNLETVNTYEGTHDVHALILGRAITGIQAFF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcgccctcagaccaaggacaagccggctgcggcttctttccagtgggacgat
ccgttcctgctcgacgagcagcttaccgaagacgagcgcatggtgcgcgacaccgcgcgc
gcctacgcccaggacaagctgctgccgcgtatcaccaaggcctatctcgaagagacgacg
gatcgcgagatcttcaacgagatgggcgaactcggcctgatcggcatcacgctgcccgag
gaatatggctgcgccaatgcgagctacgtcgcctacggcctggtcgcgcgggagatcgag
cgggtcgattccggctatcgttcgatgaactcggtgcagtcctcgctggtgatgtacccg
atctacgcctatggcgacgagaaccagcgcaagaaatacctgccgaagctcgccagcggc
gagtgggtcggctgcttcggcctgaccgagcccgatgccggctccgatccggccgggatg
aagacccgcgccgagaaggtctcggacggctaccgcctgaccggcagcaagatgtggatc
tcgaacgcgccgatcgccgacgtgttcgtggtctgggccaagtcggccgcgcatgacaac
cagatccggggcttcgtgctggagaagggcatgaagggcctctccgcgccgaagatcggc
ggcaagctcagcttgcgcgcctccatcaccggcgaagtcgtgatggacggtgtcgtggtt
ccggaagacgcgctgctgcccaacgtctccggcctcaagggcccgtttggctgcctcaac
cgcgcccgctacggcatttcctggggcgcgctgggcgcggccgaggactgcatgcaccgc
gcccgccagtacacgctcgaccgcaagcagttcggcaagccgctggccgcgacccagctc
gtccagaagaagctcgctgacatggagaccgagatcgcgctcggcctccagggctcgctt
cgcgtcggccgcctgatggacgagggcaagttcgcccccgagatgatctcgatcatgaag
cgcaacaattgcggcaaggcgctcgacatcgcccgcgtcgcgcgcgacatgcacggcggc
aacgggatctcgatcgagtaccacgtgatgcgccacgtccataacctcgagacggtcaac
acctacgagggcacccacgacgtccacgccctgatcctgggccgcgccatcacgggcatt
caggcgtttttctag
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