Bradyrhizobium diazoefficiens USDA 110: blr3062
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Entry
blr3062 CDS
T00109
Symbol
blr3062
Name
(GenBank) ORF_ID:blr3062; hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bja03400
]
blr3062 (blr3062)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
blr3062 (blr3062)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_30
FtsK_SpoIIIE
AAA_10
AAA_16
T2SSE
ResIII
Hydrolase
Zot
AAA_19
TrwB_AAD_bind
AAA_25
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAC48327
UniProt:
Q89QR2
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All DBs
Position
3379203..3380822
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AA seq
539 aa
AA seq
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MTAQDSKLGDTDDKIFVGKGDEQAWLTLALANRHGLVTGATGTGKTVSLQVMAEGFARAG
VPVFAADIKGDLSGISEVGVPADFIVKRATEMGLTFQPDQFSTVFWDVFGEQGHPVRATV
TEMGPLLLARMLDLNDVQEGVLNVAFRVADDNGLVLIDMKDLRALLDAIVPDSSKKGPDA
ADDPLADIRKAAQGFGNVTKATVGTIQRQLLVLENQGATKFFGEPALTLKDFMRTDRDGR
GMVNILVADKLLQSPRLYATFLLWMLSELFEELPEAGDLPKPKLVFFFDEAHLLFNDAPK
ALMDKIEQVVRLIRSKGVGVYFVTQNPIDVPDRVLGQLGNRVQHALRAFTPRDQKAVAAA
AQTFRPNPKLDTAKVIMELGKGEALVSFLEGNGTPAMVERVMIRPPSARIGSITPEERKA
IMDASPVKGKYDTAVDEESAYEMIQKRIAGTAATADAPAGGGGGILGQIGSIVGTIFGTN
VKRGRLSAGQVIARDVTRSVTNQVIGGMAANLGKSVGGQLGGSIGRTLVRGALGGLLRR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacaggacagcaagctcggcgacaccgacgacaagatcttcgtcggcaaggga
gacgagcaggcatggctgacgctggcgctcgccaatcgccacggcctcgtcaccggtgca
accggaaccggcaagacggtatcgctgcaagtcatggcagagggatttgcgcgcgccggt
gttccggtcttcgcggccgacatcaagggcgacctctccggcatctccgaggtcggcgtg
cccgcggacttcatcgtcaagcgcgccaccgagatggggctgacgttccagcccgaccag
ttctcgacggtgttctgggatgtgttcggtgagcagggccacccggtgcgggcgaccgtc
accgagatggggccgcttctgctcgcgcgcatgctcgacctcaacgacgtgcaggagggc
gtgctcaacgtcgccttccgtgtcgccgacgacaacggccttgtcctgatcgacatgaag
gatctgcgggcgttgctcgatgccatcgtgcccgacagcagcaagaaggggccggacgcc
gccgacgatccgcttgccgacatccgcaaggccgcccagggatttggcaacgtcaccaag
gccaccgtcggcaccatccagcgccagctcctcgtgctggagaaccagggcgccaccaag
ttcttcggcgagccggcgctgacgctgaaggacttcatgaggaccgaccgcgacggccgc
ggcatggtcaacatcctcgtcgccgacaagctgctccagagcccgcggctttacgcgaca
ttcctgttgtggatgctgtcggagctgttcgaggagctgcccgaggccggcgacctgccg
aagccgaagctggtgttcttcttcgacgaggcgcatctgctgttcaacgacgcgcccaag
gcgctgatggacaagatcgagcaggtggtccgcctgatccgctccaagggcgtcggcgtc
tacttcgtgacgcagaacccgatcgacgtgcccgaccgcgtgctcggtcagctcggtaac
cgggtgcagcacgcgctgcgcgccttcaccccgcgcgaccagaaggcggtcgctgccgcg
gcccagaccttccggcccaacccgaagctcgacaccgccaaggtgatcatggagctcggc
aagggcgaagcgctggtgtccttcctcgaaggcaacggcacgccggcgatggtcgagcgg
gtgatgatccggccgccgtcggcccggatcggatcgatcacgccggaagagcgcaaggcg
atcatggatgcgagcccggtgaagggcaaatacgacaccgccgttgatgaagagtccgcc
tacgagatgatccagaagcgcatcgccggcaccgcggcgacggcggatgctccggcgggc
ggcggcggtggcatcctcggccagatcggctcgatcgtcggcaccatcttcggcaccaat
gtcaagcgcggccgcctgtcggccggccaggtcattgcgcgcgacgtgacgcgatcggtg
accaaccaggtgatcggagggatggccgccaatctcggcaagtcggtcggcggccagctc
ggcggctcgatcggccgcaccttggtccgcggcgcgctcggcggcttgctgcgtcggtag
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