Bradyrhizobium diazoefficiens USDA 110: blr3263
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Entry
blr3263 CDS
T00109
Symbol
cobN
Name
(GenBank) cobalamin biosynthesis protein
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00860
Porphyrin metabolism
bja01100
Metabolic pathways
bja01240
Biosynthesis of cofactors
Module
bja_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
blr3263 (cobN)
Enzymes [BR:
bja01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
blr3263 (cobN)
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GFIT
Motif
Pfam:
CobN-Mg_chel
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BAC48528
UniProt:
Q89Q67
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Position
3619025..3622273
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AA seq
1082 aa
AA seq
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MHVVFRESRGLEETATPRDIGQDPADLVVLSYSDSDLAAFAAGWRRGRDSLPSLRLANLA
ELRHPLSIDTYIERTLAQARGILVRLIGGESYWPYGLAALQQLAQARGIVLAVLPADGRD
DTRLDAYSTLPVSTLRRLKVLCDTGGPVAAQAAIAQLALASGLYAGPVVGETTVPEMGFY
EPARGVIAVPTAGEGKPRALVTFYRSYLTAADTGPVDALIATLREKGFDAYGVFVTSLKA
AGVADWLRLQLVENPPAAIVNATAFSAIGDDGTTPFDAASCPVFQVALSTARREDWAESL
RGLSPGDLAMHVVLPEVDGRLFAGVVSFKSAAERDPDLQFAHLAHRPDPGRVKAIAARVA
ARQKLVVKPAGEKRLAIVLSNYPGRPHQIAHAVGLDALASVEALMSDLAGTGLDAVPVQA
LGETLLRRQLTWSVAEYSAALSRLPQSLPDDLAQAWGAPESDPSCRGGAFHFAAIQCGKS
IIAVQPERGDATTRDADYHDLARTPRHAYVAFYLWLRQQGCDAVVHMGAHGTLEWLPGKS
VALSSSCWPEALIGDLPVIYPFIVNDPGEAAQAKRRIGAVTIGHLPPPLEKSAVPDGLRR
LEQLLDEYSTADGLDPARRQRLIAAIRDEARVAGLEDDLGLDASAAPAEAIPRIDRFVCD
LKESQFGDGLHVFGRGACGEAERDALRAALAGRRIAPGPSGSPYRGRQDVLPTGRNLFAV
DPRAVPTPSAHAQGIKLAEELLRRHLQDHGDWPKGLVVDLWGSATMRTAGEEFAMALHLA
GLAPRWDRASGRVTGYDIIAPAELGRPRIDVTLRLSGLFRDVFSGLAQLFEAAAEALAAR
EEEGDENPYRHRASRVFAPRPGQYGVGLSAIPDAFTAETRDAAGEAWLSASSWAFSADGE
IKPDRAGIEKRLASADAFVHVQDLPETDLLLAADYAAHEAGVAAAAAHLGAAGPSLYHLD
ATRPDQPHARTLTEEISRVVRARAANPAWIAGMMRHGFRGAAEITATLEHMAAFAHLAGA
VPPHLFDLYYDATLGNDDVRAFMARENSAALAAMETCFTRLHEASLWRTRRNSIAAALRE
AS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgtcttccgcgagagccgcggtctcgaggagaccgcgacgccaagggacatc
ggccaggacccggccgatctcgtggtgctctcgtattcggattccgatcttgccgcgttc
gcggccggctggcggcgtggccgcgacagcctgccgtcgctgcggctcgccaatctcgcc
gaactgcgtcatccgctttcgatcgacacctacatcgagcgcacgctggcccaggcacgc
ggcattctggtccgcctgatcggcggcgagtcctattggccctacggtctcgcggctctc
cagcaactcgcgcaggcgcgcggtatcgtgctcgccgtgctgccggccgacggccgcgac
gacacgcggctcgatgcatactcaacgctgcctgtctcgacgctgcgccggctcaaggtg
ctctgcgacaccggcggtccggtcgcagcgcaggccgcgattgcgcaacttgcgctggcc
tcgggactctatgccggtccggtcgtcggcgagacgaccgtgcccgagatgggcttttac
gagcccgcgcgcggtgtcatcgccgtgccgaccgccggcgagggcaagcctcgcgcgctg
gtgacgttttatcggtcgtacctgaccgccgcggacaccggcccggtcgatgcgctgatt
gccacgctgcgcgagaagggatttgacgcctatggcgtgttcgtcacctcgctgaaggcc
gcgggcgtcgcggactggctgcggctccagctcgtggaaaatcctccggccgcgatcgtc
aatgcgaccgcgttctccgcgatcggcgacgacggcacgacaccgttcgatgcggcatcg
tgtcccgtgttccaggtcgcgctctccaccgcgcggcgcgaggactgggcggaatcgctg
cgcggcctgtcgcccggcgacctcgcgatgcatgtggtgctgcccgaagtcgacggccgc
ctgtttgcgggggtggtgagtttcaagtcggctgcggaacgtgatcccgacctgcaattc
gcgcatctggcccatcgcccggatccagggcgcgtgaaggctatcgccgcgcgcgtcgcg
gcccggcagaagctcgtggtgaagccggccggcgagaagcggctggcgatcgtgctgtcc
aactatccgggccgcccgcaccagatcgcgcacgcagtgggtcttgacgcgttggcctcg
gtcgaagccttgatgtccgatcttgcggggaccggcctcgatgccgtgccggtccaggct
ctcggtgagacgctgctgaggcggcaactcacctggagcgtcgccgaatacagcgcggcg
ctctcgcgtcttccgcaatccttgccggatgatctcgcgcaagcctggggcgcgccggag
agcgatccgagctgccgcggcggcgcgttccacttcgccgcaatccaatgcggcaagtcg
atcatcgcggttcagccggaacgcggcgatgcaaccacgcgcgacgccgactatcacgat
ctcgcccgcacgccgcgccatgcctatgtcgcgttctatctctggctccgccagcagggc
tgcgatgctgtcgttcacatgggcgcgcatggcacgctggaatggctgccgggaaaatcc
gtggcgctgtcatcgagctgctggccggaagccctgatcggtgacctccctgtcatctat
cccttcatcgtcaacgatcccggcgaggccgcgcaggccaagcggcgcatcggtgccgtc
accatcggccacctgccgccgccgctcgaaaagtccgccgtgccggatggcctgcgcagg
ctcgaacagctcctcgacgaatattcgacggccgatggtctcgatcccgcccgccgccag
cggctgatcgccgcgatccgggacgaagcccgcgtggccggactggaggacgatctcggc
ctcgatgcatcggcagcgccagccgaagcgatcccgcggatcgaccgcttcgtctgcgat
ctcaaggaaagccagttcggcgacggcctgcacgtgttcggccgcggcgcctgcggcgaa
gcggagcgggacgcgctgcgtgccgcacttgcgggccggcgcatcgcgccggggccgtcg
ggctcgccctatcgcgggcgccaggacgttctgccgacgggacgcaatctctttgccgtc
gatccgcgcgccgtgccgacgccctcggcgcatgcgcaaggcatcaagctcgcggaagag
ctgcttcgccgccacttgcaggatcacggcgactggccgaagggcctcgtggtcgatctc
tggggctcggcgacaatgcgcaccgccggcgaggaattcgcgatggcgctgcatctggcg
ggtcttgcgccgcgctgggatcgcgcctccggccgcgtcaccggctatgacatcatcgcg
ccggccgagctcggccgtccccgcatcgacgtcacgctgcggctgtcgggcctgttccgc
gatgtcttctccggcctcgcccagttgttcgaagcggcggccgaggcgctcgccgcgcgc
gaggaggagggcgacgagaatccgtaccgacaccgtgcgtcccgcgtgttcgcgccgcgt
cccgggcaatacggcgtcggcctctcggcgatccctgatgccttcacggcggagacgcgc
gatgcggccggcgaggcctggctgtcggcgtcgtcctgggcgttctccgccgacggcgag
atcaagcccgatcgcgccggcatcgagaaacggctcgcgtcggccgatgctttcgtccac
gtccaggacttgccggaaaccgatcttctgctcgccgccgactatgccgcgcatgaggcc
ggcgttgccgcggccgcagcacatctcggcgcggcgggaccgtcgctctatcatctcgac
gcgacgcgtcccgatcagccgcatgcgcgcacgctgacggaggaaatctcacgcgtggtc
cgcgcgcgcgcggccaatccggcctggatcgccggcatgatgcgccatggttttcgcggc
gccgccgagatcaccgcgacactcgagcacatggccgccttcgcccatctcgccggcgcc
gtgccgccgcatctgttcgatctctactacgacgcgacgctcggcaacgacgacgtccgc
gccttcatggcccgcgagaattccgccgcgctcgccgcgatggagacgtgcttcacccgt
ctgcatgaggcctcactctggcgaacgcgtcgcaattcgatcgcggcagcgttgcgggag
gcgtcatga
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