Bradyrhizobium diazoefficiens USDA 110: blr4575
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Entry
blr4575 CDS
T00109
Symbol
blr4575
Name
(GenBank) ORF_ID:blr4575; hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bja03009
]
blr4575 (blr4575)
Enzymes [BR:
bja01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
blr4575 (blr4575)
Ribosome biogenesis [BR:
bja03009
]
Prokaryotic type
ribosomal protein modification factors
blr4575 (blr4575)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
BAC49840
UniProt:
Q89LG9
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All DBs
Position
5067100..5068419
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AA seq
439 aa
AA seq
DB search
MDRAPRISFTSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQES
LSAIGEAMAENGKVIVTGCMGAEPEQIEQAYPGVLSITGPQQYESVLDAVHRALPPAHNP
HLDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPANDVLREAERLVGA
GVKELLVISQDTSAYGVDLKYAESPWKDRQVRAKFLDLARELGELGAWVRLQYVYPYPHV
DEVIALMTQGTVLPYLDIPFQHASPEVLKAMKRPAAQDKTLARIKRWREECPDLALRSTF
IVGFPGETDADFAYLLDWLDEAEIDRLGCFKYEPVAGATSNAIANPVPEEVKQERYNALM
ARQQKISARRLKRKVGTRQQIIIDEVGPTVARGRSKADAPEIDGAVYLSSRRPLRVGEIV
TAKIERADQYDLHGSVAGF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggacagagcgccccgcatttcattcacgtcactcggttgtcccaaggcattggtggat
tccgagcgcatcatcactcgcctgcgcgccgagggctacgagctcgcccgcaagcatgac
ggggccgacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaagcaggaatcg
ctctcggcgatcggcgaggccatggccgagaacggcaaggtgatcgtgacaggctgcatg
ggcgcggaacccgagcagatcgagcaggcctatccgggcgtgctctccatcaccggcccg
cagcaatatgagagcgtgctggacgcggtccaccgcgcgctgccgcccgcccacaatccg
catctcgacctggtgccgccgcagggcatcaagctgacgccgcggcactacgcctatttg
aagatctccgagggctgcaacaaccgctgcaccttctgcatcatcccgaagctgcgcggc
gatctggtctcgcgcccggccaatgacgtgctgcgcgaggccgagcggctggtcggcgcc
ggcgtcaaggagctgctggtgatctcgcaggacacctcggcctatggcgtcgacctgaaa
tacgccgagagcccgtggaaggatcgccaggtccgcgccaaattcctcgacctcgcgcgc
gagctcggcgagctcggggcctgggtccggctgcaatatgtctacccctacccgcatgtc
gacgaggtcatcgcactgatgacgcaaggcacggtgctgccctatctcgacatcccgttc
cagcatgcgagccccgaggtgctgaaggcgatgaagcgcccggcggcgcaggacaagacg
ctggcacggatcaagcgctggcgcgaggaatgccctgatcttgccctgcgctcgaccttc
atcgtcggcttccccggcgagaccgacgcggactttgcctatctgctcgactggctcgac
gaagccgagatcgaccgcctcggctgcttcaaatacgagccggttgccggtgcgacgtcg
aatgcgatcgccaatcccgtgccggaagaggtcaagcaggagcgctacaacgcgctgatg
gcgcgccagcagaagatctcggcgcgcaggctgaagcgcaaggtcggcacgcgccagcag
atcatcatcgacgaggtcggcccgaccgttgcccggggccggtcgaaggccgatgcgccc
gagatcgacggcgcggtctacctgtcgagccgccgccccttgcgcgtcggcgagatcgtc
acggcaaagatcgagcgcgccgaccaatacgacctgcacggcagcgtcgcagggttctga
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