Bradyrhizobium diazoefficiens USDA 110: blr5231
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Entry
blr5231 CDS
T00109
Symbol
rpoH1
Name
(GenBank) sigma32-like factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bja03021
]
blr5231 (rpoH1)
Transcription machinery [BR:
bja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
blr5231 (rpoH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_3
HTH_28
GntR
Sigma70_r4_2
DUF3431
VIT1
Motif
Other DBs
NCBI-ProteinID:
BAC50496
UniProt:
H7C6N7
LinkDB
All DBs
Position
5782781..5783707
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AA seq
308 aa
AA seq
DB search
MFNNAALPAPSVDAGLSKYLVEIRKFPLLTPEQELAYARRWREHRDRDAAYHLVTSHLRL
VAKIAMRYRGYGLPIAEIVSEGNIGLMQAVRRFDPDRGVRLATYAMWWIRASIQEYILRS
WSLVKIAASASQKKLFFKLRRAKSAISALQDGDLRPEQVRLIAERLKVAERDVVAMDRRL
RGDASLNVPIHDEDEGGQTLDWLVDPAPTCEITLAEEQEAKQRRLALANALANLNARERN
IFTARWLNEESTTLEELAAEYGVSRERVRQIEERAFQKVKAAMLTSRHEANGPPSSRAKE
MKQGVARA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaatgccgctctacctgccccgtctgtcgacgctgggctgtcgaaatatcta
gtcgagatccgtaagtttcccttgctcacgcccgagcaggagctcgcctacgcaaggcgc
tggcgcgagcaccgggatcgcgacgcagcgtaccacctggtgaccagtcatctcaggctc
gtcgccaagatagcgatgcgctatcgcggttacggcctcccgatcgcggaaattgtctcg
gaaggaaacattggcttgatgcaggctgtgaggcggtttgatccggatcggggcgttcgc
cttgccacctatgcgatgtggtggatcagggcctccatccaggagtacatcctgcggtcc
tggtcgctggtcaagatcgccgcgagcgccagccagaaaaagcttttcttcaaactgcgg
agggccaaaagcgcgatctctgcgctacaggacggcgatttgcgtccggagcaggtcagg
ctaattgctgagcgtctcaaggtggctgaacgagacgttgtcgccatggaccgccgcctg
cgtggagacgcttccttgaatgtaccgatccacgacgaggatgagggcggacaaacgttg
gattggcttgtcgatcccgcgccgacttgtgaaatcacgttggccgaggagcaggaggcc
aagcagcgtcgtctggccctcgctaacgccctcgccaacctcaacgctcgcgaacgcaac
atcttcaccgcgcgctggctgaacgaggagtcgacgacccttgaagaacttgccgcggaa
tatggagtatcccgcgaacgggttcgccagatcgaggagcgagcgtttcaaaaggtaaag
gctgcgatgctgacaagtcgacatgaggccaatggcccgccgtcttcccgcgcgaaagaa
atgaagcagggggtggcgcgggcctaa
DBGET
integrated database retrieval system
