Bradyrhizobium diazoefficiens USDA 110: blr5310
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Entry
blr5310 CDS
T00109
Symbol
blr5310
Name
(GenBank) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bja03400
]
blr5310 (blr5310)
Enzymes [BR:
bja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
blr5310 (blr5310)
DNA repair and recombination proteins [BR:
bja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
blr5310 (blr5310)
Prokaryotic type
blr5310 (blr5310)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAC50575
UniProt:
Q89JH3
LinkDB
All DBs
Position
5861448..5862776
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AA seq
442 aa
AA seq
DB search
MLDETAGRAPGGAARWWLAQSLRALGAEIAARGGSLILRKGPAAGVIPEEARESGARAVY
WNGIAQAPHQAIERRLEAALAKLGVDSQSFPGDLLVPPSAIRNKEGRGLRVFTPFWRRVL
SLGDPPKPLPAPKQLRPGPKIVSDRLESWQLAPTKPDWAGGLRERWTPGEASARARLRDF
LKTIARGYAGDRDRPDRVGTSGLSPHLRFGELSPRQVWHAARFAAAEDAALGPGIEKFLS
ELGWREFCRHLLHDHPDLATENLQTNFDGFPWQSDGKVLAAWQRGRTGYPIVDAGLRELW
HTGVMHNRVRMVVASFLVKHLLIDWRDGEAWFWDTLVDADAGSNPANWQWVAGCGADAAP
YFRVFNPQLQGEKFDPDGTYVRRWVPELQGLPAKLIHQPWQATPNELASAGVTLGKTYPQ
PIVDHARGRERALSAYAKIRKG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgagacggccggtcgcgcgccgggcggcgcggcgcgctggtggttggcacag
tcgctgcgggcgctcggcgccgagatcgccgcgcgcggcggatcgctgatcctgcgcaag
ggaccggcggcgggggtgatccccgaggaggcgcgcgaaagcggcgcccgcgccgtctac
tggaatgggatcgcccaggcgccgcatcaagcgatcgagcggcggctcgaagcggcgctg
gcaaagctcggcgtggactcgcaaagcttcccgggcgacctcctagtcccgccctcggcg
atccgcaacaaggaaggccggggcctgcgcgtgttcacgccgttctggcggcgcgtcctc
tcgctcggtgatccgccaaaacccctgcccgcgccgaagcagctgcgcccgggtccaaag
atcgtgagcgacaggctggagagctggcagctcgcgccgaccaagcccgattgggcgggc
ggcctgcgcgagcgctggacgccgggcgaagcctcggcccgcgcgcgcctgcgcgacttc
ctcaagacgatcgcgcgcggctatgccggcgaccgcgaccgcccggaccgggtgggcacg
tcaggcctgtcgccgcatttgcggttcggcgagctcagcccgcggcaggtctggcacgcc
gcgcgcttcgccgcggccgaggatgcggcgctcgggcccggcatcgagaagttcctgagc
gagctcggctggcgcgaattctgccgccacctcctccacgaccaccccgacctcgccacc
gaaaacctgcaaacgaacttcgacggcttcccgtggcagtccgacggcaaggtgctcgcc
gcctggcagcgcgggcgcaccgggtatcccatcgtcgatgccggcctgcgcgagctctgg
cacaccggtgtgatgcacaaccgggtgcggatggtggtggcgtccttcctggtcaagcac
ctcctgatcgactggcgcgatggcgaggcctggttctgggacacgctggtcgatgcggat
gccggcagcaatcccgccaactggcagtgggtcgcgggctgcggcgccgatgctgcgccc
tatttccgcgtgttcaatccgcagctgcagggcgagaagttcgatcccgatggaacctat
gtccggcgctgggtgccggagctgcaaggactgccggcgaagctgatccaccagccctgg
caggcgacgccgaacgagctggcgagcgccggcgtcacgctcggcaagacctatccgcag
ccgatcgtcgatcacgcccggggacgcgagcgcgcgctctccgcctacgcaaagatccgc
aaaggttga
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