Bradyrhizobium diazoefficiens USDA 110: blr7431
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Entry
blr7431 CDS
T00109
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
blr7431 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bja03400
]
blr7431 (uvrB)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
blr7431 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
blr7431 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AAA_16
Kinesin
SWI2_SNF2
Microtub_bd
DUF2963
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAC52696
UniProt:
Q89DK8
LinkDB
All DBs
Position
8168891..8171818
Genome browser
AA seq
975 aa
AA seq
DB search
MAKKPASSEKSGKSPKSKAPSKAPNSKAHRPDVQPIGPALAELLNPAINRGDAGLGSGTG
LQPPPDNSRDRRAGGEAAAHRARASTPKDFPSDRPAGLDEAPQANYGTAATIPTLDPELA
RQLGLPTEEDDAEALARPPRSKMEALGVKATADALESLIREGRPEFRKDDGSTKVWTPHR
PPRPEKSEGGVRFEIKSHYEPRGDQPTAIAELVEGIERNDRSQVLLGVTGSGKTYTMAKV
IEATQRPAIILAPNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKD
SSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTAMTFALKKGERIDQRQL
IADLVALQYKRTQADFTRGTFRVRGDVIDIFPAHYEDRAWRVNLFGDTIETIEEFDPLTG
HKQDELEFIKMYANSHYVTPRPTLVQAIKSIKSELKQRLDQLHDQGRLLEAQRLEQRTTF
DLEMMEATGSCAGIENYSRYLTGRLPGEPPPTLFEYVPDNALVFADESHVTVPQIGAMFK
GDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMMRPQTIAVSATPSGWELNESGGVFVEQV
IRPTGLIDPPVNIRPARTQVDDLVGEVRATAQAGYRSLITVLTKRMAEDLTEYLHEQGIR
VRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGLDIPECALVAILDADKEGFLRSE
TSLIQTIGRAARNVDGKVILYADQMTGSMERAIAETNRRREKQVEYNTANGITPESVKKQ
IGDILNSVYERDHVLVEVGGQDMTDDVISIGHNFEAVLADLETRMREAAADLNFEEAARL
RDEVKRLRATELAVVDDPTAKQRTVQGKAGAYAGTKKYGDAANLPVSAMKRKTVSSALKA
SGGGSGSKVHKPHLDEMHGPESLPYREKPSLPAKPFGSTSRIIQPTDSRQSGPEFGPTPR
SSGGAPGHRGGWKKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaacctgcatcctccgaaaaatccggcaaatcccccaagtccaaggccccg
tccaaggccccgaactcgaaggcgcaccgccctgacgtgcagccgatcgggccggcgctg
gccgagctgctcaatcccgccatcaaccgcggcgatgccgggcttggatcgggcaccggc
ctccagccgccgccggacaattcgcgcgaccgccgcgccgggggcgaggccgccgcgcat
cgcgcgcgcgcctcgacgccgaaggactttcccagtgaccgcccggcgggactcgacgag
gcgccgcaggccaattacggcaccgcggccacgatcccgacgctcgatccggaactggcg
cggcagctcggcctgcccaccgaggaggacgatgccgaggcgctggcgcgtccgccgcgc
agcaaaatggaggcgctcggcgtcaaggcgaccgcggatgcgctggagtcgctgatccgc
gagggccggccggagttccgcaaggacgacggctccacgaaggtatggaccccgcatcgg
ccgccgcgcccggaaaagtccgaaggtggcgtgcgcttcgagatcaagtcgcactacgag
ccgcgcggcgaccagccgaccgcgatcgccgagctcgtcgagggcatcgagcgcaacgac
cgcagccaagtgctgctcggcgtcaccggaagcggcaagacctacaccatggccaaggta
atcgaggcgacgcagcgccccgccatcatcctggcgccgaacaagacgctggccgcccag
ctctatggcgagttcaagaacttcttccccgacaacgcggtcgaatatttcgtctcgtat
tacgactactaccagccggaagcgtacgtcccgcgcaccgacacctatatcgagaaggac
tcctcgatcaacgagcagatcgaccgcatgcgccactcggcgacgcgcgcgctgctcgaa
cgcgacgacgtcatcatcgtcgcctcggtgtcctgcatctacggtatcggctcggtcgag
acctacaccgcgatgaccttcgcgctgaagaagggcgagcgcatcgaccagcgccagctg
atcgccgacctcgtcgcgctccagtacaagcgcacccaggccgatttcacccgcggcacc
ttccgggtcagaggcgacgtcatcgacatcttcccggcgcactatgaggaccgcgcctgg
cgcgtgaacctgttcggcgacaccatcgagaccatcgaggagttcgatccgctcaccggc
cacaagcaggacgagctcgaattcatcaagatgtacgccaactcgcactatgtgacgccg
cgcccgacgctggtgcaggcgatcaagtcgatcaaatcggaattgaagcagcggctcgat
cagctgcacgaccagggccgccttttggaagcgcagcggctggagcagcgcaccaccttc
gacctcgagatgatggaggcgaccggaagctgcgccggcatcgagaactattcgcgctat
ctcaccggacgcctgcccggcgagccgccgccgacgctgttcgaatacgtgcctgacaac
gcgctggtgttcgccgacgaaagccacgtcaccgtcccccagatcggcgccatgttcaaa
ggcgacttccgccgcaaggcgacgctcgccgaatacggtttccgcctgccctcctgcatg
gacaaccgcccgctccgcttcgaggaatgggacatgatgcggccgcagaccatcgcggtg
tcggcgacgccgagcggctgggagctgaacgagagcggcggcgtgttcgtcgagcaggtc
attcgcccgaccgggcttattgatcctccggtcaacattcgccccgcccgcacccaggtc
gacgatctggtcggcgaagtccgcgccaccgcgcaggccggctatcgctcgctgatcacg
gtgctgaccaagcgcatggcggaggatctcaccgaatatctgcacgagcagggtattcgc
gtccgctacatgcactcggatatcgacaccatcgagcgcatcgagatcatccgggatctc
cggctcggcgcgttcgacgcgctggtcggcatcaacctcctgcgcgagggcctcgacatt
cccgaatgcgcgctggtcgcgattctcgacgccgacaaggaaggctttttgcgcagcgaa
acgtccttgatccagaccatcggccgcgccgcgcgcaacgtcgacggcaaggtgatcctc
tatgccgaccagatgaccggctcgatggagcgcgccatcgccgagaccaatcggcgccgc
gaaaaacaggtcgagtacaacaccgccaacggcatcacgccggagagcgtgaagaagcag
atcggcgacatcctcaattccgtctacgagcgcgaccacgtgctggtcgaggtcggcggc
caggacatgaccgacgacgtcatctcgatcggacacaatttcgaagccgtgctcgccgat
ctcgaaacccgcatgcgcgaggccgccgccgatttgaacttcgaggaagccgcgcgcctg
cgcgacgaagtcaagcgcctgcgcgccaccgagctcgcggtggtcgacgaccccaccgcc
aagcagcgcaccgtccagggcaaggccggcgcctatgccggcaccaagaagtacggcgac
gcggcgaacctgcccgtcagcgcgatgaagaggaaaaccgtgagctccgcgctgaaggcc
agcggcggcggcagcggctcgaaggtgcacaagccgcatctcgacgagatgcacggcccg
gaatcgctgccctaccgcgagaagccgagcctgccggcaaagccgttcggcagcacgagc
cggatcatccagccgacggactcgcgacagtcaggaccggagttcggccccaccccgcgc
tccagcggcggcgcgccggggcatcgcggcgggtggaagaagaggtag
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integrated database retrieval system