Bradyrhizobium diazoefficiens USDA 110: blr8088
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Entry
blr8088 CDS
T00109
Symbol
blr8088
Name
(GenBank) ORF_ID:blr8088; hypothetical protein
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
BAC53353
UniProt:
Q89BR0
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Position
8870920..8874219
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AA seq
1099 aa
AA seq
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MTVVDDAERRRVLTDLDSTLLVEAGAGTGKTSLLAGRVVMLMASGTSPGAIVAITFTELA
AGELRHRISTYLEALLGGAVPRELRLCLPDGPTPEQRRSLAVAAERLDELTCGTIHSYCH
DLLLSYSVEAGIDPGAEVLDADHADFLFDSTFDRWWRDRLDRPHAAADDPIAVVARRNPT
RAEELLRSFSKFRRRYRSAKPQPSDLDPSADLEFIESVREFRRWCDHVDVPPEADPDIVA
LEALASHFDGAFTPLPGFERLWELAHPPHLPIMRKDASVLLDYRRRSLWRKVAGKADGDR
LADQAEEHYARCRTAYGALMGRIATAIIGSFSNELDGVLADYEAFKRSAAVLDFDDLLYT
CRQVLRDFPIVRNTAGERFSRILVDEFQDTDPLQAEIIFLLCSDAADAAAWHTKALRPGQ
LFVVGDPKQAIYRFRGADLATYLTVRQSIERQFPGNIVKVSANFRSRDPILRHVNECFSE
HLSQQQAGYVALHATRGASDNALPGVAKISVELPPETNVASARDEEARVVAEVCARLIGN
VELKLNDGRARRLTPGDIALLAPVSTDLWRYERALEEAGIPFASQAGKNLFKRQEAQDLV
ALVRALADPRDTLALGALLRGPLVGLTERELLDITSDLPPSEDPDQIAGLTILTDPATVH
HDTAREVLGILGDLRRRVNGTSPAMILAEAIERLRVRSIVAARSADQAVRSLANIDGFLE
RARSYRVRGFARFARDIDEEWSDGSSSAEGMVEADGQSIEIVTVHSSKGLEWPVVIPINR
ASMPRRSETFVYRRSDESLHWALGKIIPPSLADALLTEEAEKRAENLRLLYVACTRAMES
LIIPDFSWSNDDSWAKLLSFRSDTIPQLDISGFPRARVSPSSAAENLQSAEIFAEERARL
EAAPKVRWITPSEGDPDVITEQLAWEAGDDEPLRARTTVEGGRIRGILLHKLMEELVTGE
LVESSEDAASRAAQLRDQLFSVSPSTTVDAEELAATALKTIRLPELKPFRSGLMAEVPIH
AVAAAGADHLIVGRADAIARTEDGDTVAFDWKSDAAPKDTDRSAYRQQLAQYLYAIGARK
GAVVYMTSGRLDWVTLVPR
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggtcgacgatgccgagcgcaggcgggttctgacggatctggattcgacgctg
ctggtcgaggcgggcgccggaacgggcaagacttctctcctcgccggacgcgtcgtgatg
ctgatggcctccggcacatctccaggcgcgatcgttgccatcactttcaccgagctcgcg
gcgggcgaattgcggcatcgcatttcgacctatctggaagctctgctcggcggcgccgtt
ccgcgcgagcttcggctttgtctgcccgacggccccacgccggaacaaaggcgatcgctg
gcggtggccgccgagcggcttgacgagctgacatgcggaacgatccattcctattgtcac
gaccttctgctgtcttattcggtggaagccggaatcgatccgggcgccgaggtgctcgat
gcggaccacgcggatttcctgttcgattcgaccttcgatcgatggtggcgggatcggctc
gaccgacctcacgctgcagcggacgaccctattgctgtagtggcccgcagaaacccgact
cgcgccgaggaactactgcgcagcttctcgaagttccgtcgacgctatcgttcggccaag
cctcagccctcggacctcgatccgagcgcagatctggagttcatcgaaagcgtgcgcgaa
tttcgccgctggtgcgatcacgtcgacgttccacccgaagccgatccggacatcgtcgct
ctcgaggccctcgcctctcacttcgacggggccttcaccccccttcccggcttcgagcgt
ctctgggagctggcccacccaccacacctgcccatcatgcggaaggacgcatcggtattg
ctcgactacagacgccgctccttgtggcggaaggtagccggcaaggctgacggcgatcgg
ttggccgaccaggccgaggaacactacgcacgatgtcgcacggcgtacggggccttgatg
ggtcggatcgcgaccgccatcatcggcagcttttcgaacgaactcgacggcgtgctggcc
gactacgaagcgttcaaacgaagtgccgccgttctcgacttcgacgatctgctgtatacc
tgtcgtcaagtgctgcgcgattttccgatcgtgcggaacacggccggcgagcggttctcc
cgcatcctcgtcgacgaattccaggacaccgacccgctccaggcggagataatctttctg
ctgtgctccgacgccgcggacgccgccgcatggcacacaaaagcgctgaggccggggcag
ctattcgtcgtgggcgaccccaagcaggcgatataccgatttcgcggcgccgacctcgcg
acctatctcactgtccgacaatccatcgagcgccaatttcccggcaacatagtcaaggtc
tccgcaaactttcgctcgcgcgacccgatcctgcgccacgtcaacgaatgcttctcggag
catctatcgcaacagcaagctggatacgtcgcattgcacgcgacccgcggcgcttccgac
aacgccttgccgggcgtcgcgaagatatccgttgaactccctcccgaaacgaacgtcgcc
agtgcgcgggacgaagaagcccgcgtcgtcgccgaggtatgcgctcggcttatcgggaat
gtcgagctgaagctcaacgacggtagagcgcgtcgactgacccccggcgacatcgcgctg
ttggctcccgtctcgaccgatctatggcggtacgagcgggccttggaggaggccggaatt
ccattcgcatcgcaggccggaaagaacctgttcaagagacaggaagcccaggacctcgtg
gcactggtcagggctctcgccgatcctcgggatactctcgcgctcggagccctattgcgc
ggaccgttggttggcctgaccgaacgcgaacttctggacatcacgtcggacctcccgcct
tcggaggatcccgaccaaatcgccggactgacgatcctgaccgatccggcgacagtccat
cacgacaccgcgcgcgaagttctcggcattctcggcgatctccgcagacgcgtgaacgga
accagtccggcaatgatcctcgcggaagcaatcgagcggttgcgcgtgcgcagcatcgtc
gcagcgaggagcgcggaccaggcggtcagatcgctggcgaacatcgatgggttcctcgaa
cgcgctcgtagctaccgggttcgcgggttcgcgcggttcgcgagagatatcgacgaagag
tggtccgacggttcgagttccgcggagggcatggtcgaagccgacggacaatcgatcgag
atcgtcacggttcattcttcaaagggtctcgagtggccggtggtcattcctatcaatcgg
gcgtccatgccgcggcgttccgagaccttcgtgtaccggcgcagcgacgagagcctgcac
tgggctctcggtaagataatcccgccgagccttgcagatgctcttcttacggaggaagct
gaaaagcgagccgagaatctgcggctcctctacgtcgcctgcacgcgggccatggaaagc
ctcattattccggacttctcttggagcaacgacgactcgtgggccaagctgctgagcttc
cggtccgacaccataccgcagctggacatctcgggctttcctcgcgccagagtttctccg
tcgagcgcggccgagaatcttcagagcgccgaaatcttcgcagaggagcgagcccggctc
gaagcggcaccgaaggttcggtggatcacgccgagcgagggcgaccccgatgtgatcacg
gagcagctcgcatgggaggcgggtgatgacgagccgctccgcgcccggacgacagtagag
ggcggacgcatacgcggcattctgctgcacaagttgatggaagaacttgtgaccggcgaa
ctcgtcgaaagctccgaagatgccgcttcgagagcggcgcagcttcgcgatcaactgttt
tccgtctcgccgtccactaccgtagatgcggaagagctcgcggccacggccctcaagact
atccggctgcccgaactgaagccctttcgcagcggactgatggcggaggtaccgatccat
gccgtggcggccgccggcgccgaccatctgatcgtgggccgcgccgacgcgattgcgcgc
accgaagacggcgacaccgtcgccttcgattggaagagcgacgccgcgcccaaagatacc
gaccgctccgcttatcggcagcagctcgctcaatatctttacgcgatcggagctcggaaa
ggggccgtggtctacatgacgtccggccgcctcgattgggtcaccctcgtcccgcgatga
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integrated database retrieval system
