Bradyrhizobium diazoefficiens USDA 110: blr8131
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Entry
blr8131 CDS
T00109
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03030
DNA replication
bja03410
Base excision repair
bja03420
Nucleotide excision repair
bja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
blr8131 (polA)
03410 Base excision repair
blr8131 (polA)
03420 Nucleotide excision repair
blr8131 (polA)
03440 Homologous recombination
blr8131 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bja03032
]
blr8131 (polA)
03400 DNA repair and recombination proteins [BR:
bja03400
]
blr8131 (polA)
Enzymes [BR:
bja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
blr8131 (polA)
DNA replication proteins [BR:
bja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
blr8131 (polA)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
blr8131 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
blr8131 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BAC53396
UniProt:
Q89BL7
LinkDB
All DBs
Position
8924702..8927773
Genome browser
AA seq
1023 aa
AA seq
DB search
MPKTSPKTTAKADTKAAAPKTAADSKSAATTAAKPVAAKAAGKGDHVFLVDGSSYIFRAY
HALPPLNRKSDGLQVNAVLGFCNMLWKLLRDMPADNRPTHLAIVFDKSEVTFRNKIYPEY
KAHRPPAPDDLIPQFALIREAVRAFDLPCLEQGGFEADDLIATYAREASDRGATTTIVSS
DKDLMQLVNDRITMYDTMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIG
IKTAAQLIVDYGDLEQLLFRATEIKQPKRREALIENAEKARISRKLVLLDDKVELEVPLD
DLAVHEPDARKLIAFLKAMEFSTLTRRVADYSQIDPANVDADVANSSEARGGDSAARTTS
SATSGDLFAAPAVTATGGDKGGKSASIKGAPISLAAAREEALRKLPVDRGKYQAIKTLAE
LNAFIARIHDAGHVAIEIRANSIDPMQADLCGVALSLAPNDACYVPLAHKQSGGGAGLFD
GGLAPDQVKHADAIDALRPVLESSGILKIGFDVKFTAVMLAQHGITLRNTDDAQLISYVL
DAGRGSHGLESLAERWFGHAMLKEGELLGSGKGKITFDQVPIDKAAPLSAEGADMALRVW
RVLKPRLVAEHMTTVYETLERPLVAVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEI
QEIAGEPVNVGSPKQIGDILFGKMSLPGGTKTKTGAWSTTAQVLDELAEQGHDLPKKILE
WRQVSKLKSTYTDALPEYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKI
RRAFIATPGHKLVSADYSQIELRLLAEIADIPVLKQAFRDGLDIHAMTASEMFGVPIKGM
PSEIRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETRDFC
RQHGYVTTLFGRKCHYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRVEDALAE
KKLSAQMLLQVHDELIFEVPDAEVEATLPVVQHVMQDAPFPAVLLSVPLHVDARAAKNWD
EAH
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagacatccccgaagaccaccgccaaagctgacaccaaggctgccgcgcccaag
acggccgccgacagcaaatccgctgcgacaactgctgccaaaccggtggcggcgaaggcg
gccggcaagggcgaccatgtcttcctggtcgacggttcctcctacatcttccgcgcctat
cacgcgctgccgccgctgaaccgcaaatccgacggtcttcaggtcaatgccgtgctcggc
ttctgcaacatgctgtggaagcttttgcgcgacatgccagccgacaaccggccgacgcat
ctggccatcgtgttcgacaagtcggaggtcaccttccgcaacaagatctaccccgagtac
aaggcgcaccggccgccggcgcctgacgatctgatcccgcaattcgcgctgatccgcgag
gccgtgcgcgccttcgacctgccctgcctggaacaaggcggcttcgaggccgacgatctg
atcgcgacctatgcgcgggaggcgagcgaccgcggtgccaccacgaccatcgtgtcctcc
gacaaggacttgatgcagctcgtgaacgacaggatcacgatgtacgacaccatgaaggat
cgccgcatcggcattcccgaggtgatcgagaaatttggcgttccgccggagaaggtggtc
gaggtgcaggcgctcgccggcgattccaccgacaacgtgcccggcgtgcccggcatcggc
atcaagaccgcggcgcagctgatcgtcgattatggcgacctcgagcagctcctgttccgc
gcgaccgaaatcaagcagccgaagcggcgcgaggcgctgatcgagaatgccgagaaggcg
cggatctcgcgcaagctggtgctgctcgacgacaaggtcgagctggaggtgccgctcgac
gacctcgccgtccacgagcccgacgcgcgcaagctgatcgccttcctgaaggcgatggag
ttctccacgctgacgcgccgcgtcgccgactattcgcagatcgatcccgccaatgtcgat
gccgatgtggcgaacagcagcgaggcccgcggcggcgacagcgcggccaggacgacctcg
tccgcgacgtccggcgatctcttcgccgctcctgcggttacggcaacgggcggcgacaaa
ggcggcaagtcggccagcatcaagggcgcgccgatctcgctcgccgccgcgcgcgaagag
gcgctgcgcaagcttccggtcgaccgcggcaagtaccaggcgatcaagacgctcgccgaa
ttgaacgccttcatcgcgcgcattcacgatgccggccatgtcgcgatcgagatcagggcg
aactcgatcgatccgatgcaggccgatctctgtggcgtcgcgctgtcgctcgcgccgaac
gatgcgtgttacgtgccgctggcgcacaagcagtccggcggcggcgccggcctgttcgac
ggcggccttgcgcccgatcaggtcaagcatgccgacgcgatcgacgcgttgcggccggtg
ctggaatcatcgggcatcctcaagatcggcttcgacgtcaaattcaccgccgtcatgctg
gcgcagcacggcatcaccttgcgcaacaccgacgacgcccagctgatctcttatgtgctc
gacgccggccgcggctcgcacgggctggaatcgctcgccgagcgctggttcggccacgcc
atgctgaaggagggcgagttgctcggcagcggcaagggcaagatcaccttcgaccaggtg
ccgatcgacaaggccgcgccgctgtcagcggaaggcgccgacatggccttgcgggtctgg
cgcgtgctgaagccgcgcctcgtcgccgagcacatgacgacggtctatgagacattggag
cggccgctggtcgcggtgctcgcgcgcatggagcggcgcggcatctcgatcgatcgccag
gtgctgtcgcgtctctccggcgacttcgcccagaccgcggcccgcgtcgaagccgagatc
caggagatcgcgggcgagccggtcaatgtcggcagccccaagcagatcggcgacatcctg
ttcggcaagatgagcctgccgggcggcaccaagaccaagaccggcgcatggtcgaccacc
gcgcaggtgctcgacgagctcgccgagcagggccacgaccttccgaaaaagattctggag
tggcgccaggtctcgaaactcaaatcgacctacaccgacgcgctgcctgaatacgtcaat
ccgcagacccatcgcgtgcacacgacctacgcgctggccgcgaccacgacgggccggctg
tcgtcgaacgagccgaacttgcagaacatcccggtgcgcaccgaggacggccgcaagatt
cgccgcgctttcatcgcgacgcccgggcacaagctcgtctccgccgactattcgcagatc
gaattgcggctgctggccgagatcgccgacatccccgtgctgaagcaggcgttccgcgac
gggctcgacattcacgccatgaccgcgtcggaaatgttcggcgtgccgatcaagggcatg
ccgagcgaaatccgccgccgggccaaagcgatcaatttcggcatcatctacggcatctcg
gcgttcggcctcgccaaccagctcggcatcgcgcgcgaggaggcctcggcctacatcaag
aagtatttcgagcgcttccccggcatccgcgcctatatggacgagacgcgcgatttctgc
cggcaacacggctatgtcaccacgctgttcggccgcaagtgccactatcctgatatcaag
gcgtcgaacgcctcggtgcgcgccttcaacgagcgcgccgcgatcaacgcgcgtcttcag
ggcaccgcagccgacatcatccgccgtgccatgacgcgggtggaggacgcactcgccgag
aagaaactctcggcgcagatgctgctccaggtgcatgacgaattgatcttcgaggtgccg
gacgccgaggtcgaggcgacgctgccggtcgtgcagcacgtcatgcaggacgcgccgttc
ccggccgtgctgctgtccgtgccgctgcacgtcgatgcacgcgccgcgaagaactgggac
gaggcgcattga
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