Bradyrhizobium diazoefficiens USDA 110: bsl8312
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Entry
bsl8312 CDS
T00109
Symbol
hupT
Name
(GenBank) HNS-type DNA binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bja03032
]
bsl8312 (hupT)
03036 Chromosome and associated proteins [BR:
bja03036
]
bsl8312 (hupT)
03400 DNA repair and recombination proteins [BR:
bja03400
]
bsl8312 (hupT)
DNA replication proteins [BR:
bja03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
bsl8312 (hupT)
Chromosome and associated proteins [BR:
bja03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
bsl8312 (hupT)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
bsl8312 (hupT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAC53577
UniProt:
Q89B54
LinkDB
All DBs
Position
complement(9100347..9100625)
Genome browser
AA seq
92 aa
AA seq
DB search
MTTATEIADEIAKAYNLPKAQAKAIVDGVFKSIADAAASDAETNVPGFGKFKVKHTPERE
GRNPSTGATIKIAAAKKLTFAPAKALKDVLNG
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgccactgaaatcgccgacgagatcgccaaggcgtacaatctgccaaaggcg
caagccaaggccatcgtggacggtgtcttcaagtctatcgccgatgcagcagcgagcgac
gctgaaaccaatgtgccgggctttggcaagttcaaggtgaagcacaccccggaacgcgaa
ggccgcaatccctcgactggcgcgacgatcaagatcgcggcggcgaagaagctgacgttc
gccccggccaaggccctcaaggatgtgctgaacggctaa
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integrated database retrieval system
