Borreliella japonica: QIA21_03115
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Entry
QIA21_03115 CDS
T09309
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bjo
Borreliella japonica
Pathway
bjo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bjo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QIA21_03115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bjo03021
]
QIA21_03115
03400 DNA repair and recombination proteins [BR:
bjo03400
]
QIA21_03115
Enzymes [BR:
bjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QIA21_03115
Transcription machinery [BR:
bjo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QIA21_03115
DNA repair and recombination proteins [BR:
bjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QIA21_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RAD51D_N
Ribosomal_S6
Motif
Other DBs
NCBI-ProteinID:
WKC88166
LinkDB
All DBs
Position
512292..513326
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AA seq
344 aa
AA seq
DB search
MPLEKFLKDFTIPERIEFLKSQDDGSYGKFTIYPFERGFGVTIGNTLRRVLLSSIEGYAI
TAMRVQSNNKDSSSKVVSSEFDLIPGVSEDTLEVIANIKNIHLKLGEGEQRKTISFSVSG
KDTNVLKASHFERDGVEVFNKDLVIATLSHDVSLDLEFQINYGRGYVSSEQNSKYLEEVN
VIALDSIFSPIEKVSYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLF
PLVDFEDNVNISFEKSKSESSNLLDMGIEKLDLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLGSYQLFLGMSKEDALSVLSKNVKISE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcctttagaaaaatttttgaaagatttcactatacctgagagaattgaatttttgaaa
agccaagatgatggatcttatggtaaatttacaatatatccttttgaaagaggttttggg
gttactatagggaatactttaagacgtgttttactttcttctattgaagggtatgcgatt
actgctatgagagttcaatctaataataaagactcttcgtcaaaagttgtttcaagtgaa
tttgatttgatccccggagtttctgaagatactcttgaggtcattgctaatattaaaaat
attcatttgaaacttggagaaggagagcaaaggaagacaataagcttcagtgttagtggc
aaagatactaatgttttgaaagcttctcattttgaaagagatggggtcgaggtttttaat
aaagatttagttatagccactttatcacatgatgtgagtttagatcttgaatttcaaatt
aattatggtagaggttatgtgtcttctgagcaaaattccaagtatttagaagaagttaat
gttattgctttagattctatattttcgcctatagagaaagtatcatattctgtagaagat
actagagttgggcaaaggtcagattatgataagcttgtgatggaaatttggactacaggg
gtgatttctgccaaagatgcaataaaaaaggccgcatcaatagtaagagagtttttattt
cctcttgtagattttgaagataatgttaatatatcttttgagaaatcaaaatcagaaagt
tctaatttacttgatatgggtattgagaaattggatttgtcagttagatctttaaattgt
ttagccaaagaaaatgttagaactttaggggaacttattagtaaaaatgcagaagagctt
tctaaagcgagaaattttggaaaaaaaagtttagaagagatcattgaaaaacttggttct
taccaattgtttttaggaatgtccaaagaggatgctttatctgtattgagtaagaatgtt
aaaatatctgaataa
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