Borreliella japonica: QIA21_03795
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Entry
QIA21_03795 CDS
T09309
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bjo
Borreliella japonica
Pathway
bjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QIA21_03795 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bjo03400
]
QIA21_03795 (recB)
Enzymes [BR:
bjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QIA21_03795 (recB)
DNA repair and recombination proteins [BR:
bjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QIA21_03795 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PDDEXK_1
Viral_helicase1
AAA_30
UvrD_C_2
AAA_22
PhoH
DEAD
Motif
Other DBs
NCBI-ProteinID:
WKC88280
LinkDB
All DBs
Position
complement(669299..672808)
Genome browser
AA seq
1169 aa
AA seq
DB search
MDKILEKIQNNATILIEASAGTGKTHILENVVINLMKTKLYSINEILVLTFTNKATEEMH
TRILKAIENAYFNSKKNEIFKETYEQSKKLFISTINKFALHALNNFQIETENYSKYKPKE
KFSKEIEEIVYDFLRKSDSLIQDLDIKDYELKVFKSDAKKTEEIVLKIKKAYERDATQEL
GDWLKIQTPFEKILLKKEELIKDYNKIIEDLDKMTTDEILSFYNKHIQTGKLEIQFSKES
NIFKIAETLLKNKFFSTLIEKEIKKNAKLLPKELNIKNDLINLGINIKHEKYKSEDNRNK
NRNNLKQYVLLKVEYKILKYIEKELEKIIKSTNTIDQNYIISNLKNYLKTEDKKLLNAIK
NRYKIILIDEAQDLSLTQIEIFKILKTAGIKLIFIADPKQIIYSFRKADIAFYNKKIKNK
INTDARIVLETNHRSSKKLIEPLNRIFNNIYNNAIADEIEKIEFTNSLSNQKNDNNSIFI
NGQEIEGVNIITANAENKEDIYQKTALTIKYLLAYGTIAENNKIRNIKMQDIKVLCRGKN
EINLIDKALKKEKIQTNKAQEKFLKTKEFNEIFYILKCLDRKQSFKTLNYILNSKMLNVP
WNLQRILITEDKIHLIEEFIENIIVLLEKNEITLINAINKIAFEKNLWIKIANKTEDQKI
IEWAKNKINYKGLLIAEGKLENLRIYETALETISKIYHKEQNIQSLISTLENLIINEEPE
NIEERTNNINNDNESIELMTIHKSKGLSMNIVFLINTTPIGNSNVFSKKNHFYKFYQDGK
IGYDFFKLEENKKYARLKILSEEKNIFYVGATRAKFALFITKINSITSKLLEMAKVFTID
NIKQDFNIYEFISQKKFNKEKNNTNLNTKLIPPKPIIKNMFKKEYTSSFSSLTAQANHIA
FYENYDFKNINYEKEADLDYDPTLEDSLPKGKDIGNILHAAMEEIIFSTAKDTFDNFKKN
NIEIIEKQIQKINSNLNTIEIQNSLTKMIYNILTYNIKAINIRLCDIEELQKEMEFLIKI
NPKFQKQKHLFDNHFENLHIKLNDGYLKGIVDLIFKANNKIYILDYKTNYLGKDKEDYSI
TNLENIVKKEYYDLQYKIYALGIKNILFKNKKEYNQKFGGIIYLFTRAFKDNIECLQSKF
ENGIYFNIPKFNDVDLDEIILELSIKRHL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatcctagaaaaaattcaaaataacgcaacaatattaatagaagcatcggcg
ggtactggaaaaactcacatacttgaaaatgtggttataaatttaatgaaaaccaaacta
tactccataaatgaaatcttggtattaacttttacaaacaaagccacagaagaaatgcac
acaagaatactaaaagcaatagaaaatgcttattttaactcaaaaaaaaatgaaattttt
aaagaaacatatgagcaatcaaaaaaactctttatatcaacaatcaataaattcgcatta
catgctttaaataattttcaaattgaaacagaaaattattccaaatacaaacctaaagaa
aaattttcaaaagaaatagaagaaatagtttatgactttctaagaaaatcagatagctta
attcaagatcttgatattaaagactatgaacttaaggtatttaaatctgatgctaaaaaa
acagaagagattgttttaaaaataaaaaaagcttacgagagagatgcaactcaagaactt
ggagattggcttaaaattcaaacaccatttgaaaaaattcttcttaaaaaagaagaattg
atcaaagattacaacaaaataatagaagacttggataaaatgacaacagatgaaatatta
agtttttataataaacatattcaaactggtaaacttgaaatacaattctctaaagaaagc
aacatattcaaaatagcagaaacattattaaaaaataaatttttttcaactctaatagaa
aaagaaattaaaaaaaatgctaaattattacctaaagaacttaatattaaaaatgattta
atcaatttaggaattaatattaaacatgaaaaatataaatcagaagacaatagaaataaa
aatagaaataatttaaagcaatatgttcttttaaaagttgaatacaaaatactaaagtac
atagaaaaagaactagagaaaattattaaatcaacaaacacaatagatcaaaattacata
atttcaaatttaaaaaattacttaaaaacagaagacaaaaaacttttaaatgcaatcaaa
aatcgatacaaaatcattttaattgatgaggcacaagatttaagcttaacacaaatcgaa
atatttaaaatattaaaaacagcaggaataaaattgatattcatagctgatcctaaacag
ataatatattcctttagaaaagcagacattgcattttataacaaaaaaataaaaaataaa
attaacacagatgctagaattgtcctagaaacaaatcacagatcaagtaaaaaactcatc
gagcctttaaatagaatttttaataatatatacaataacgcaatagccgatgaaattgaa
aaaattgaatttaccaattcactttcaaatcaaaaaaatgacaataatagcattttcatt
aacggacaagaaatagaaggggtaaatataataaccgcaaatgccgaaaacaaagaagat
atttaccaaaaaacagcattaacaataaaatatttacttgcatatggaacaattgctgag
aacaataaaattagaaatattaaaatgcaagacattaaagtactttgtagaggaaaaaat
gaaatcaatttaatagataaagcattaaaaaaagagaaaatccaaacaaacaaagctcaa
gaaaaatttttaaaaaccaaagaatttaacgaaattttctatattcttaagtgcctagac
cgaaaacaaagttttaaaaccttaaattatattctaaacagtaaaatgttaaatgtgcca
tggaatttacaaagaattttaataacagaagacaaaattcaccttatagaagaatttatt
gaaaatataatagttttgcttgaaaaaaatgaaataacattaataaatgcaatcaacaaa
atcgcattcgaaaaaaacttgtggatcaaaattgcaaataaaaccgaagatcaaaaaatt
attgaatgggcaaaaaataaaataaattacaaaggtcttcttattgcagaaggtaagctt
gaaaatttaagaatctatgaaacagcacttgagaccatctctaaaatataccataaagaa
caaaacatacaatctttaatctctactttagaaaatctaataataaacgaagagcccgaa
aacatcgaagaaagaaccaataatataaataatgataatgaatctatagagttaatgaca
atacacaaatcaaaaggacttagcatgaacatcgtattcttaataaatacaactccaata
ggaaatagcaatgttttttcaaaaaaaaatcatttttacaaattttatcaagacggaaag
attggatatgacttttttaaattagaagaaaacaaaaaatatgcaagactaaaaatacta
agcgaagaaaaaaatatattttatgtgggagcaacaagagctaaatttgctctatttatt
acaaaaataaatagcataactagcaaattattagaaatggcaaaagtttttactattgac
aatatcaaacaagattttaacatatatgaatttattagccaaaagaaatttaataaagaa
aagaacaatacaaatctgaatacaaaattaatcccaccaaaaccaataattaaaaacatg
tttaaaaaagaatatacatctagtttttcaagtttaacagcacaagctaatcatatagca
ttttatgaaaattatgattttaaaaatatcaactacgaaaaagaagcagatcttgattac
gaccctacattagaagatagtttacctaaaggaaaagatatcggaaacattttgcatgct
gcaatggaggaaataatctttagtacggcaaaagatacatttgataattttaaaaaaaat
aacattgaaatcattgaaaaacaaatacaaaaaatcaactcaaatctcaatacaatagaa
atacaaaattcattaactaaaatgatttataatatattaacttataacataaaagcaatt
aatattcgtttatgtgatattgaagaattacaaaaagaaatggaatttttaatcaaaata
aatcctaaatttcaaaaacaaaaacatctttttgacaatcattttgaaaaccttcacata
aaactaaatgacggatacttaaaaggaatagtagatctcatatttaaagctaataataaa
atatatatcctggattacaaaacaaactatcttggaaaagataaagaggactacagtata
acaaatttagaaaatatagtaaaaaaagaatattatgatttgcaatataaaatatatgca
cttggaataaaaaatatattatttaaaaacaaaaaagaatataatcaaaaatttggtgga
ataatatatctttttacaagagcattcaaagacaacattgaatgcttgcaatcaaaattt
gaaaatggcatttattttaatattccaaaatttaatgacgtggatttagatgaaatcatc
ttagaattaagtatcaaaaggcacctatga
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