Borreliella japonica: QIA21_04780
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Entry
QIA21_04780 CDS
T09309
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bjo
Borreliella japonica
Brite
KEGG Orthology (KO) [BR:
bjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bjo03032
]
QIA21_04780 (topA)
03400 DNA repair and recombination proteins [BR:
bjo03400
]
QIA21_04780 (topA)
Enzymes [BR:
bjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QIA21_04780 (topA)
DNA replication proteins [BR:
bjo03032
]
Prokaryotic type
DNA Topoisomerases
QIA21_04780 (topA)
DNA repair and recombination proteins [BR:
bjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QIA21_04780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WKC88455
LinkDB
All DBs
Position
complement(876833..879382)
Genome browser
AA seq
849 aa
AA seq
DB search
MQNKKLIIVESPTKAKTIKKFLDDSFLVEACIGHIVDLPNNAKEIPKEYKKYEWANISID
YNNGFNPIYIIPSNKKPVVLKLKKLVKTINEIYLATDQDREGETIAFHLKEVLKIKNYKR
MIFHEITETAITESLKNTRDIDMNLVNAGEARRILDRLYGYTISPLLWKKIAYGLSAGRV
QSVGLKLLIEKEKTRINFKKANYYSILLQCKHDKKDLLLETKLEEIDDKNIAEGKDFANE
TGKLKNSTKTIIINQDLMIKLEKELENGKKIELISIETKKIKIPPPKPFTTSTLQQEINK
RLKIGTKQIMQHAQKLYEHGYITYMRTDSHNIAKIARDKITKIIKTKYGKDYIEKKERIY
EKGKMTQNAHEAIRPSEMFIPNENIEIEGKAAKEIYKIIWDRTIISGMKDAIKENIKLTF
KYKNLIFKSSFTKIIFDGFLKHTKEKDEYLNINFDLIKKGDIFSIVKMKTSEHETKAPFR
YTEASLVQKMEKEGIGRPSTYSTIISTLLEREYAFKLNNTLIPTIKGAAVINLLEKYFPV
LIELNFTSNMEEKLDKIAIGKLDKIKYLNKFYNGKNGLKYTTMQLEPKINSSEFRTVIEN
QNIKNKDNSINYTINIGKYGPYLIFKGHNYSINTTTPLENLYKKDEIEKIVNEKELKPNI
LGIDPLTGLNVIFKNTIYGNIVQLGEDTYAPQEYTKKGKPKKLKIIKAKKASTKKIDPEN
ITLELALKLLSLPKTIGKYPQTNEQIIAATGVFGDYIKTESGSIACSLKKDIKAYNITLD
EAVSLLNERVNKVGIIVKMITFSKNKIGNKIYIYKKNDKFYAKIKRKKVDLPDNISLDEI
NEKYVFSLL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaaaaattgataatagttgaatcgccaacaaaagctaaaacaataaaaaaa
tttttagacgactcattcttagtagaagcatgcattggacatatagtagatctaccaaac
aatgcaaaagaaattcccaaagaatataaaaaatacgaatgggcaaatatttctatagat
tataacaatggatttaacccaatttacattattcctagcaataaaaaaccagttgtatta
aaactaaaaaaattggtaaaaacaatcaatgagatatatcttgcaaccgaccaagataga
gaaggagaaactatagcatttcacttaaaagaagtattaaaaattaaaaactataaacgg
atgatattccatgaaatcacggaaactgcaataaccgaatcactaaaaaatactagagat
atagacatgaatcttgttaatgctggtgaagctcgaagaatattagaccgactatacgga
tacacaatttctccactactttggaaaaaaatagcttatggactttctgctgggcgagtg
caatccgttggattaaaactattaatagaaaaagaaaaaactagaataaattttaaaaaa
gccaattattattcaattttacttcaatgtaaacatgataaaaaagatttattacttgaa
acaaaattagaagaaattgacgacaagaatatagcagagggtaaagactttgcaaatgaa
accggaaaacttaaaaatagcaccaaaacaataataataaaccaagatttaatgatcaaa
cttgaaaaagaattagaaaatggaaaaaaaattgaattaatttcaatagaaactaaaaaa
ataaaaatacctcctccaaagccatttactacatcaacacttcaacaagaaataaataag
cgccttaaaattggaacaaagcaaataatgcaacacgctcaaaaactttacgaacacgga
tacattacctatatgagaacagactctcataatattgctaaaattgcaagagataaaata
acaaaaataataaaaaccaaatacggaaaagattatatagaaaaaaaagaaagaatttat
gaaaaaggaaaaatgactcaaaatgcacatgaggcaataaggccttctgaaatgtttatt
ccaaacgaaaacatagaaatagaaggcaaagccgctaaagaaatttacaaaataatatgg
gatagaactattatttctggaatgaaagatgcaataaaagaaaatataaaactgactttt
aagtataaaaacttaattttcaaatcaagctttacaaaaataatttttgatggatttctt
aaacatactaaagaaaaagatgaatatcttaacataaactttgacttaataaaaaaggga
gatatattttctatagttaaaatgaaaacaagcgaacacgaaacaaaagctccatttaga
tatacagaagcatctcttgtgcaaaaaatggaaaaagaaggaataggtcgtccttcaacc
tattctacaattatatcaacactcctagaaagagaatatgcattcaaacttaacaacaca
ttaataccaactataaaaggggctgctgtaataaatcttcttgagaaatattttccagta
ctaattgaactaaatttcacctctaatatggaagaaaaattagataaaatagcaatagga
aagctagataaaataaaatatctaaacaaattctataatggcaaaaacgggctaaagtat
acgacaatgcaactagagcctaaaattaattcctccgaatttagaactgttattgaaaat
caaaacataaaaaataaagataatagcattaattatacaataaacattggcaaatatggg
ccttatttaatattcaaagggcataattactcaataaacacaacaactccattagaaaat
ttgtacaaaaaagatgaaatagaaaaaatagtaaatgaaaaagaattaaaaccaaatata
cttggtattgatcccttaacagggcttaatgtaatcttcaaaaatacaatttatggaaac
atagtacaactcggagaagacacttatgctcctcaagaatacacaaaaaaaggaaaacct
aaaaaattaaaaataataaaagcaaaaaaagcatcaactaaaaaaattgaccccgaaaac
ataacattagagcttgctttaaaattgctctcactaccaaaaacgatcggtaaatatcct
caaaccaatgaacaaatcattgctgcaactggtgtttttggagattatattaaaactgag
agcggaagtattgcttgctcgctaaaaaaagatataaaagcatataatataacactagac
gaggctgtcagtctgctcaacgaaagagttaataaagtaggcataatcgttaaaatgatc
acattttctaaaaacaaaatcggcaacaaaatatatatttacaaaaaaaacgacaaattt
tatgctaaaattaaaagaaagaaggttgatttacctgataacattagtcttgacgaaata
aatgagaaatatgtattcagtttgttgtaa
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