Bradyrhizobium japonicum E109: RN69_02655
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Entry
RN69_02655 CDS
T03509
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bjp
Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bjp03032
]
RN69_02655
03400 DNA repair and recombination proteins [BR:
bjp03400
]
RN69_02655
Enzymes [BR:
bjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RN69_02655
DNA replication proteins [BR:
bjp03032
]
Prokaryotic type
DNA Topoisomerases
RN69_02655
DNA repair and recombination proteins [BR:
bjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RN69_02655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF905
Motif
Other DBs
NCBI-ProteinID:
AJA59437
LinkDB
All DBs
Position
complement(562739..563908)
Genome browser
AA seq
389 aa
AA seq
DB search
MMDQQNLGTMRLASADPAAVALAKALGQWPKPAGSARLSPKKVFDSAPAATVEALAKELG
LRLGDQNELTIRRIRRGKGYSFVRPNGAHIRDARTIRRLHAMAVPPAYREVRYSADPSSH
LQAVGRDAAGRLQYRYHADWEKVREHRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTMLKSNVTLDDDSFVLTFKAKGGKAVRKEC
DAAKLVRAIGILNGVPGKRMFQYRDAYGIVRAVSTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPASSQRGRKKQVLDAIRAAADKLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLQQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgatgcggctcgcttcggccgatcctgctgctgtc
gcgctggccaaagccctcggacaatggccgaaacccgccggttcggcccgtctcagcccg
aaaaaggtcttcgatagcgcgcccgccgcgacggtcgaggcgctcgccaaggagctgggg
ctgcggctcggcgaccagaacgagctgaccatccgccgcatcaggcgcggcaagggctat
tccttcgtccgccccaatggcgcgcatattcgcgacgcccgcaccatccgcaggctgcac
gccatggcggtgccgccggcctatcgcgaggtgcgttactcggccgatccgagctcgcat
ctccaggcggtgggacgcgatgccgcgggccggctgcaataccgctatcacgccgattgg
gaaaaggtccgcgagcaccgcaaggcgcaccggctggaaaagctcgtcggcgcgctgcca
aagatccggcgcaaggtctcggcgttcctgtcgggtgacgagccgacgcgcgaattcgca
ctctcggccgtgatcgagctgatcgcacgcaccgcgatccgtcccggcaacgaatcctat
gcccgcctcaacggcacccgcggcgccaccacgatgttgaagtcgaacgttacgctcgat
gacgattccttcgtgctgaccttcaaggccaagggcggcaaggcggtgcgcaaggagtgc
gacgcggccaagctggtacgcgccatcgggatcctcaacggcgttcccggcaagcgcatg
ttccagtatcgcgacgcctacggcatcgtgcgcgcggtcagcaccacgcaggtaaacgcg
tttctgcgcgagatcgccggcatcaagatttcgctgaaggattttcgcacgctgatggcg
tccgcggtcgtggtggaatcgctgtcgcggatcacaccggcgagcagccagcgcggccgc
aagaagcaggtgctggacgccatccgcgccgcagccgacaagctctccaacacgccggcg
atctgccgcaagagctacgtccacgacaccatcgtcaccgccttcgaggacggtatcctc
gaacgcttcgccgccaccatgaagggccagcgttcgcaggccaggcgcgagcaactcttg
cagcaggtggtggcgaccgcggcggtgtga
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