Bradyrhizobium japonicum E109: RN69_03680
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Entry
RN69_03680 CDS
T03509
Name
(GenBank) recombinase RecB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bjp
Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bjp03400
]
RN69_03680
Enzymes [BR:
bjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RN69_03680
DNA repair and recombination proteins [BR:
bjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RN69_03680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJA59615
LinkDB
All DBs
Position
complement(781155..784301)
Genome browser
AA seq
1048 aa
AA seq
DB search
MRVFSVPISVPFLRTVVSSLLDGRLVDGFEARKEPARLADATLYLPTRRAMRVVREIFLD
EMAADAVVLPRIVALGDIDEDELAFADEGEQFSGAAPLDIPPRLGELERRLTLAQLVAAW
AKGPVLSPLVVGGPASTLALAGDLARLIDDMVTRGVDWSALDGLVPDMLDRYWQHSLEFL
RIARIAWPGHLAEINRIEPAARRDLLIAAEARRLTAHPHGPVIAAGSTGSMPATAKFLHA
VASLPHGAVVLPGLDTDLDEDAWRTIGGVRDSLGKFVEHPASNHPQYAMHALLDRFGIKR
SDVDILQPPAEGGRDLLASESMRPSARTEVWHDRLKQPDVAAKIAGGMTNLAIVEAPNPE
MEALAIAIAMREARHLDKSAALVTPDRALARRVMAALTRWDLAFDDSGGDVLMETSAGVF
ARLASEAATKGLEPPTLLAMLKHPLCRLGRLPGGWKAAIEGLELAVLRGTRPPAGTAGLL
REFNRFREELAKLWRKEVSALHHAEPRARLKAEDLDRIQALIDALRQALAPIESLASSKP
YDFAELAHRHREIMIELSRDEQGIPLAFEEREGLALAAAFDDLLRGGTTSGLMVTLPDYA
DVFQTAFSDRAVRRRDRPGARLQIYGPLESRLMQADRIIIGGLIEGVWPPAPRIDPWLSR
PMRHELGLDLPERRIGLSAHDFAQLLGGDEVILTHSAKAGGAPAVASRFLHRLEAVAGDE
LWKTAIRAGEKYVQFAGALDQPDEVRPVKQPEPRPPRATRPLKMSVTAIEDWLRDPYTIY
AKHILRLDALDPVDMPLSAADRGSAIHDALGEFTESYATRLPADPARVLRAIGEKYFAPL
MERPEARALWWPRFQRIARWFGEWETARRDVIEVITAETRGEISIRLDHERSFQLSARAD
RIERRQGGSYAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFPDIDAGSSVSQLVY
VRLSGNNPPGEERILELKYRQGDEPQPPDTAAAEARAKLEALIRAFEDESQAYTSLNLPM
WTNRYGTYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcagcgttcccatctcagttccgttcctgcgcacggtcgtctcgagcctg
ctcgacggccggctggtcgacggattcgaggcgcgcaaggaaccagcgcggctcgcggat
gccacgctgtacctgccgacaaggcgcgccatgcgcgtcgtgcgcgagatctttctcgac
gagatggcggccgatgcggtggtcctgccgcgcatcgtcgcgctcggcgacatcgacgag
gacgaactcgctttcgccgacgagggcgagcagttctccggcgcggcgccgctcgatatt
ccgccgcggcttggcgagctggaacggcggctgacgctggcgcagctcgttgctgcctgg
gccaagggcccggtgctgtccccgctggtggtcggcggccccgcctcgacgctcgcgctg
gccggcgacctcgcacgcctgatcgacgacatggtgacgcgcggcgtcgactggagcgcg
ctcgacggcctggtgcctgacatgctcgaccgctactggcagcactcgctcgaattcctg
cgcatcgcgcgcattgcctggcccggtcatctcgcggagatcaaccggatcgagcccgcg
gcgcggcgcgatctcctcatcgctgcggaagccaggcggttgaccgcgcatccccatggt
ccggtgatcgccgccggctccaccggctcgatgccggccaccgcaaaattcctgcatgcg
gtcgcgtcgctaccgcatggcgcggtggtgctgccgggcctcgacaccgatctggacgag
gacgcctggcgaaccatcggcggcgtacgcgactcgctcggtaaattcgtggagcatccg
gcgtcgaaccatccgcaatatgccatgcacgcgctgctggatcgcttcggcatcaagcgc
agcgacgtcgacatcctccagccgccagcagaaggcggccgcgatctgctcgcatcggaa
tcgatgcggccgtctgccaggacggaagtctggcacgaccggctgaagcagcctgatgtc
gccgcgaagatcgcgggcggcatgacgaatctcgcgatcgtcgaagcccccaatcctgaa
atggaagcgcttgcgatcgccattgcgatgcgcgaggcacgccatctcgacaaatcggcg
gcgctggtgacgcccgaccgcgcgctggcgcggcgggtgatggccgcactgacgcgatgg
gatctcgccttcgacgattccggcggcgacgtgctgatggaaacatccgccggcgttttt
gcacgtctggcatcggaagcggcgaccaagggattagagccgccgacgctgctggcgatg
ctgaagcatccgctgtgccggcttggccggctgcctggcggatggaaggcggcgatcgag
ggcctcgagcttgcggtcttgcgcggcacgcggccgcctgcgggcaccgcgggcctgctg
cgcgaattcaatcgtttccgcgaggagctggcaaagctgtggcgcaaggaggtctctgcg
ctccaccacgcggaaccgcgcgcgcgtctgaaggcggaggacctcgatcgcatccaggcg
ctgatcgatgccctgcgacaagcgttggcgccgatcgagagtctcgcgtcatcgaaaccg
tacgacttcgccgagctcgcgcaccggcatcgcgagatcatgatcgagctgtcgcgcgac
gagcagggcatcccgctcgccttcgaggagcgcgagggcctggcgctcgcagccgccttc
gacgacctcctgcgcggcggcaccaccagcggattgatggtgacgctgcctgactatgcc
gacgttttccagaccgcgttcagcgaccgggccgtgcggcggcgggacagacccggcgcg
cggctgcagatctacggcccgctggaatcgcgcctgatgcaggcggaccggatcatcatc
ggcggcctgatcgagggcgtctggccgccggcgccgcgcatcgatccctggctcagccgg
ccgatgcggcacgagcttggccttgatctgccggagcgccgcatcggcctctccgcacac
gacttcgcgcaactgctcggcggtgacgaggtgatcctgacccattccgcgaaggccggc
ggcgcaccggcggtcgcctcgcgcttcctgcaccggttagaggcggtcgcgggcgacgag
ctctggaagacggccatccgcgcgggcgaaaaatacgtgcagtttgcgggcgcgctggac
cagcccgacgaggtcaggccggtcaagcagcccgagccgcggccgccgcgcgcgacgcga
ccgctgaagatgtcggtgaccgcgatcgaggactggctgcgcgatccctacacgatctac
gcaaagcacattttgcggctcgacgcgctcgaccccgtcgacatgccgctgtcggccgcc
gaccgcggctcggcgatccacgatgcgctcggcgagttcacggaaagctacgccacgcgc
ctgcccgccgatcccgcgcgcgtgctgcgcgcgatcggcgaaaaatattttgcgccgctg
atggagcgtcccgaggcgcgcgcactgtggtggccgcgtttccagcgcatcgcgcgctgg
ttcggcgaatgggagacggcacgccgcgacgtgatcgaggtcatcacggcggagacccgt
ggcgagatctcgatccggcttgaccacgagcgcagcttccagctctccgcccgcgccgac
cggatcgagcggcgccagggcggcagctatgccatcctcgactacaagaccgggcagccg
ccgaccggcaagcaggtccgcatgggcctgtcgccgcagctgacgctggaagccgcgatc
ctgcgcgagggcggattccctgacatcgacgcgggttcgtccgtcagccagctcgtctat
gtgcgcctgagcggcaacaatccacccggcgaggagcgcatcctcgagctcaagtatagg
caaggcgacgagccgcagccgcccgacacggccgccgccgaagcacgggccaagctggag
gcgctgatccgtgccttcgaggacgagagccaggcgtacacctcgctgaaccttccgatg
tggaccaaccgctacggcacctatgacgacctcgcccggatcaaggaatggtccgcggcc
ggcggtttggggatcgaggaatggtga
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