Bradyrhizobium japonicum E109: RN69_03860
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Entry
RN69_03860 CDS
T03509
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bjp
Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bjp03016
]
RN69_03860
Enzymes [BR:
bjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RN69_03860
Transfer RNA biogenesis [BR:
bjp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RN69_03860
Prokaryotic type
RN69_03860
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AJA59646
LinkDB
All DBs
Position
complement(821888..823006)
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AA seq
372 aa
AA seq
DB search
MTMDPAHGTIGGEETDQRDVQKNNFADLGGDSQPHQEPRRVNNDPRANKQKGNQPRRDRR
DVHGWVVLDKPIGMTSTQAVAVLKRLFNAKRAGHAGTLDPLASGGLPIALGEATKTVPFV
MDGRKRYQFTVCWGEERDTDDIEGRVTATSDQRPTREAILALLPRFTGVIEQIPPRYSAI
KVQGERAYDLARDGEVVELAPRPVEIHHLTLVDQPDNDRAVFEAECGKGTYVRALARDMG
RILGTYGHICALRRTLVGPFGENDMIPLDQLEALCDRAASGEGSLADALMPVETALDDIP
ALAVTRADAARLHRGQAVLLRGRDAPTSSGTVYVTVAGRLLALAEVGNGEIIPKRVFNLT
GLTASTGRNERN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggacccggctcacggcacgatcggcggcgaagagaccgatcagcgcgacgtg
cagaaaaataattttgcggatctcggcggcgattcccagccgcatcaggagccgcgccgc
gtcaacaacgatccccgcgccaacaagcagaagggcaaccagccgcgccgcgaccgccgc
gacgtccatggctgggtcgtgctcgacaagccgatcggcatgacctcgacgcaggcggtc
gccgtgctcaagcgcctgttcaacgccaagcgcgcgggacacgccggcacgctcgacccg
ctcgcctccggcggcctgccgatcgcgctcggcgaggccaccaagacggttcccttcgtg
atggacggccgcaagcgctaccagttcactgtgtgctggggcgaggagcgcgacaccgat
gatatcgagggccgggtcaccgcgacctccgaccagcgcccgacccgggaggccatcctg
gccctgctgccccgcttcaccggggtgatcgagcagatcccgccgcgctattccgcgatc
aaggtccagggcgagcgcgcctatgacctcgcccgcgacggcgaggtcgtggaactggcc
ccccgtccggtcgaaattcaccatttaacccttgtggatcaaccggataacgaccgggcg
gtgttcgaggccgagtgcggcaagggcacctatgtccgggcgctggcccgcgatatgggc
cggattctcggcacttacggccatatctgcgcgctgcggcggaccctggtcggcccattt
ggcgagaacgacatgattccgctggatcagttggaggctttatgcgatagagccgcgtcc
ggcgagggcagcctcgccgacgcgctgatgcccgttgagaccgcgctggacgacatcccg
gcactggccgtcactcgggctgatgcggcaaggctccataggggccaggccgttttattg
cgcggacgggatgcgcccactagtagcggcacagtctatgtcacggtggcaggccgtcta
ttggcgcttgctgaagtcggcaacggcgaaatcatccccaagcgtgtgttcaacctgacc
ggtctgactgccagcaccggtcgcaacgagagaaattga
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