Bradyrhizobium japonicum E109: RN69_04000
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Entry
RN69_04000 CDS
T03509
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
bjp
Bradyrhizobium japonicum E109
Pathway
bjp00250
Alanine, aspartate and glutamate metabolism
bjp00310
Lysine degradation
bjp00350
Tyrosine metabolism
bjp00650
Butanoate metabolism
bjp00760
Nicotinate and nicotinamide metabolism
bjp01100
Metabolic pathways
bjp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RN69_04000 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RN69_04000 (gabD)
00310 Lysine degradation
RN69_04000 (gabD)
00350 Tyrosine metabolism
RN69_04000 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RN69_04000 (gabD)
Enzymes [BR:
bjp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RN69_04000 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RN69_04000 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RN69_04000 (gabD)
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GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
AJA59673
UniProt:
A0A0A3XT84
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Position
853005..854498
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AA seq
497 aa
AA seq
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MTPTAAARAPQATSNLRDRLKDPSLLKEACYIDGAWVGSPVFAVNNPATGIELAKVPQLG
ADDTTKAVEAAERAFPAWAKHTAKQRSNILRKWFELIIANREDLALILTSEQGKPLSEAL
GEVDIGAAYIEFFAEEARRVYGETIPTQRPDARLLAIKQPIGVCGAITPWNFPNSMITRK
VSPALAAGCTVVLKPANETPLSALALAVLAEKAGVPKGVLNIITGDAPPIGKVLCEHPAV
RFVGFTGSTAVGKILYQQASVGVKRLGLELGGNAPFVVFDDADIDAAVEGAIVSKYRNMG
QTCVCANRIYAQDKIYDEFVQKLSKKVAAMKIGDGTESGVTQGPLINLKAVDKVERHIAD
AVKRGAKVVTGGKRSELGRSFFEPTVLADVKPDSLVAQEETFGPLAPVIRFKDEADVIAM
CNASPFGLASYFYSRDLGRVWRVAEALESGMVGVNTGLITTEVAPFGGVKESGLGREGSR
HGMEEYVEIKYVMMAGV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgactgccgccgcacgcgccccgcaagccacgtccaatctgcgcgaccggttg
aaggatccgtcgttgctgaaggaggcctgctacatcgacggcgcctgggtcggctcgccg
gtcttcgcggtgaacaatcccgcgaccggcatcgagctcgcgaaggttccgcagctcggt
gcagacgatacaaccaaggcggtcgaagccgccgagcgcgcctttccggcctgggccaag
cacaccgccaagcagcgctccaacatcctgcgcaaatggttcgagctgatcatcgccaac
cgcgaggatctcgcgctgatcctgacctccgagcagggcaagccgctctccgaggcgctc
ggcgaggtcgatatcggggccgcctatatcgagttcttcgccgaggaagcccgtcgcgtc
tatggcgagaccatcccgacgcagcggcccgatgcgcgcctgctcgcgatcaagcagccg
atcggcgtctgcggcgccatcacgccgtggaatttcccgaactcgatgatcacccgcaag
gtttcgccggcgctggcggccggctgcaccgtggtgctgaagcccgccaacgagacgccg
ctctcggcgctggcgctggccgtgctcgccgagaaggccggcgtgcccaagggcgtgctc
aacatcatcaccggtgacgcgccgccgatcggcaaggtgctgtgcgagcatccggcggtg
cgcttcgtcggcttcaccggctcgaccgcggtcggcaagatcctctaccagcaggcctcc
gtcggcgtgaagcggctcggcctcgagctcggcggcaatgcgccgttcgtggtgttcgac
gatgccgatatcgatgcggcggtcgaaggcgcgatcgtctcgaaataccgcaacatgggt
cagacctgcgtctgcgccaaccgcatctacgcccaggacaagatctacgacgagttcgtg
cagaagctctcgaagaaggtcgcggcgatgaagatcggcgatggcacggagagcggcgtc
acgcagggcccgctgatcaatttgaaagcggtcgacaaggtcgagcgccacatcgcggac
gccgtcaagcgcggcgccaaggtcgtcaccggcggcaagcgcagcgagctcggacgttcg
ttcttcgagccgaccgtgctcgccgacgtcaagccggactcgctggtggcgcaggaagaa
acctttggtccgctcgcgccggtgatccgcttcaaggacgaggccgatgtgatcgcgatg
tgcaacgcctcgccgtttggcctggcttcgtacttctactcccgcgatctcggccgcgtc
tggcgcgtcgccgaagcgctggaatcaggcatggtcggcgtcaacaccggcctgatcacg
accgaagtcgcgcccttcggcggcgtcaaggaaagcggtttgggccgcgaaggctcgcgt
cacggcatggaagaatatgtcgagatcaaatacgtgatgatggcgggggtgtaa
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