Bradyrhizobium japonicum E109: RN69_04005
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Entry
RN69_04005 CDS
T03509
Name
(GenBank) transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
bjp
Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bjp03000
]
RN69_04005
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bjp01504
]
RN69_04005
Transcription factors [BR:
bjp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RN69_04005
Antimicrobial resistance genes [BR:
bjp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
RN69_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AJA59674
UniProt:
A0AA87UMK3
LinkDB
All DBs
Position
complement(854625..855542)
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AA seq
305 aa
AA seq
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MDFLQQLRVFVAVAENRSFTRAAEALRATRPTVTNAVNELEESIGARLLHRTTRQTSLTS
EGRLFYDRSVAILNEVGQARNLFGGVGDAPKGRLRVDIPVAIAKPLIIPNLPDFQAKYPD
IDLILGVSDQPVDLIAEGVDCVLRIGDLPVSSLVGRVLAKMAMLICASPVYLDRFGVPET
VEDLRGHLAVNYFSGRGHIAIPWRLPRGTDERELRLETGVLVNDTEAFVACALAGMGLIQ
VPGCVVKDYLNSGELVRVLPKLRPVHRPLSIMFPAREHLAPQVRVFIDWAKSIVADVDSP
WLSPP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggatttcctgcagcaattgagggtcttcgtggccgtggcggagaacaggagtttcacc
cgggcggccgaggcccttcgcgcgacccgaccgacggttacgaacgccgtgaacgaactg
gaagagtcgatcggtgcaaggctgctacatcgaacgacgcgccagacctccctgacgagt
gaagggcggttgttctatgatcgctcggtcgcaatattgaacgaggtcggccaggcacgt
aacctgtttggcggcgtgggcgacgcgccgaaaggacgcctgcgggtcgacatcccggtc
gcgattgcgaagccgctgatcattcccaatcttccggacttccaggcgaaatacccggac
atcgatctcattcttggcgtcagcgatcagccggtcgatctgatcgcggagggtgtcgat
tgtgttctgaggataggcgacctgccggtcagcagcctcgtcgggcgcgttctcgccaag
atggccatgttgatctgcgcatcaccggtttacctcgacaggttcggcgttccggaaact
gtcgaggacctgcgtggccatctcgcggtcaactatttctcaggcaggggccatatcgcc
ataccttggcgcctgccgcggggaactgacgagcgcgaacttcgccttgaaaccggtgtc
ctcgtgaacgacacggaggccttcgttgcgtgcgcgctcgccggcatggggctcatccag
gtgcccggttgcgtcgtcaaagactacttgaacagcggagagctcgtgcgggtcctcccg
aagttgcgccccgtccatcgcccgctgtcgatcatgtttccggcacgcgagcatctggcg
cctcaagtgcgggtattcatagattgggcgaagagtatcgtcgccgatgtggacagtccc
tggctcagcccaccttga
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