KEGG   Bradyrhizobium japonicum E109: RN69_05755
Entry
RN69_05755        CDS       T03509                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bjp  Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:bjp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bjp03400]
    RN69_05755
Enzymes [BR:bjp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RN69_05755
    5.6.2.6  RNA 3'-5' helicase
     RN69_05755
DNA repair and recombination proteins [BR:bjp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RN69_05755
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: AJA59969
LinkDB
Position
1253076..1255652
AA seq 858 aa
MPPRILKIPAEPATLLPDRFQAWFAARGWSPREHQLALLDKAREDRSALLIAPTGAGKTL
AGFLPTLVELSTQPVERGAGAKQSLVSTGRDVRRSDGLHTLYISPLKALAVDIARNLERP
IAEMGLPIKVETRTGDTPVSRRQRQRRYPPDILLTTPEQVALLLSSDDAPFLFSSLRRIV
LDELHALVTSKRGDLLSLGLARLWQLAPQLRAIGLSATVAEPDQLARFLVPQPGGKEAAA
DSVVAGGAAPPLVEMLDTRERLPWAGHSARHALPEIYELIKANRTTLVFVNTRSQAEMLF
QNLWSMNDDNLAIALHHGSLDVAQRRKVEDAMSAGRLRGVVCTSSLDLGVDWGDVDLVVN
IGAPKGSSRLMQRIGRANHRLDEASRAVLVPANRFEVLECRAAIDAIAENAQDTPPLRTG
ALDVLAQHVLGRACGEPFLSDDLYGEVLTAAPYSDLARQDFDDVVDFVASGGYALKTYER
FARIKQDKQGRWRVANPKVRQSYRLNVGTIVEEPMLKVRLVRGRSSGSGSTGAIARGGRL
LGEIEEYFIEGLTAGDTFVFGGEVVRYEALAEDQVYVSRANDKDPKVPSYMGGKFPLSTY
LAERVRRLLDDRRAWNGLPEQVRDWLSLQKDVSRVPGVRELLVETFPRGNKHYLICYPFE
GRLAHQTLGMLLTRRLERMRARPLGFVANEYAVAIWGLGDASFMIRNGQLDLDALFNPDM
LGDDLEAWLAESALMKRTFRNCALISGLIERRFTSEDKSRRQVLFSTDLVYDVLRKHQAD
HVLLRAARADAATGLLDLRRLGAMLARIQGRITHRELDHVSPLAVPVMLEIGRESVYGEA
GDELLAEAADELVKEAMG
NT seq 2577 nt   +upstreamnt  +downstreamnt
gtgccgccccgcatcctcaaaatcccggccgagccggccacgctgctgcccgaccgcttc
caggcgtggttcgcggcccgcggctggtcgccgcgtgagcatcagctcgcgctgctggac
aaggcccgagaggatcgttccgcactgctgatagcccccaccggcgcgggcaagacgctg
gcgggatttctgccgacgctggtggagctctcgacgcagccggtcgaacggggcgcaggg
gcgaagcaaagcctcgtctccaccggccgcgatgttcgccgcagcgatggcctgcatacg
ctctacatctcgccgctgaaagcgctcgccgtcgacatcgcccgcaatctcgaacggccg
attgcggagatggggctgccgatcaaggtcgagacgcgcaccggcgatacaccggtgtcg
cggcggcagcgccagcggcgctatccgcccgatatcctgctgacgacgcctgagcaggtc
gcgctgctgctctcctccgatgacgcgccgttcctgttctcctcgctgcgacgcatagtg
ctcgacgagctccacgcgctggtgacgtccaagcgcggggatctgctttcgctggggctg
gcgcggctctggcagctggcgccgcagctgcgcgcgatcggcctgtcggcgaccgtggcc
gagccggaccagcttgcgcgcttcctggtgccgcagcccggcgggaaggaggcggccgcc
gacagtgtcgtcgccggcggtgccgcgccgccgctggtcgagatgctggatacgcgcgaa
cgcctgccctgggccggccacagcgcgcgccacgcgcttcccgaaatctacgagctgatc
aaggccaacaggaccacgcttgtcttcgtcaacacccgcagccaggccgagatgctgttc
cagaatctctggagcatgaacgacgacaacctcgcgatcgcgctgcatcacggctcgctc
gacgtcgcccagcgccgcaaggtcgaggacgcgatgtcggcgggcagactgcgcggcgtg
gtctgcacctcctcgctcgatctcggcgtcgactggggcgatgtcgatctcgtcgtcaat
atcggagcgccaaaaggttcttcgcgtctgatgcagcggatcggccgcgccaatcaccgc
cttgatgaagcctcgcgcgcggtgctggtgccggcgaaccggttcgaggtgctggagtgc
cgcgccgcgatcgatgcgatcgccgagaatgcgcaggatacgccacccttgcgcaccggc
gcactcgacgtgctggcccagcacgtgctcggccgcgcctgcggcgagccgtttctgagc
gatgatctctacggcgaggtgctcacggccgcgccttactcagatctcgcccgacaagat
ttcgacgacgtcgtcgatttcgtcgcctccggcggctacgcgctgaagacctatgagcgc
ttcgcccgcatcaagcaggacaagcaggggcgctggcgcgtcgccaatccaaaggtccgg
cagagctatcgtctcaatgtcggcaccatcgtcgaggagccgatgctgaaggtgcggctc
gttcgtgggcgctccagcggcagcggctcgaccggtgccatcgcgcgcggcggccgcctg
ctcggcgaaatcgaagaatattttatcgagggcctgaccgccggcgacacctttgtgttc
ggcggcgaagtcgtgcgctatgaggcgttggccgaggatcaggtctatgtctcccgcgcc
aacgacaaagacccgaaagtgccgtcctatatgggcggcaaatttccgctctcgacctat
cttgccgagcgcgtgcggcgcctgctcgacgaccgccgtgcatggaacggtctgcctgag
caggtgcgcgactggctgtcgttgcagaaagacgtctcacgtgtgccgggcgtgcgcgaa
ctgctggtcgagacctttccacgcggcaacaagcactatctcatttgctatcccttcgag
ggcaggctcgcgcaccagacgctgggcatgctgctgacgcggcggctggagcggatgcgc
gcccggccgctcggcttcgtcgccaatgaatatgcggtggcgatctgggggcttggcgat
gcctccttcatgatccgcaacggccagctcgatctcgacgcgctgttcaacccggacatg
ctcggggacgatcttgaagcctggctcgcggaatccgcgctgatgaagcgcacctttcgc
aattgcgcgctgatctccggcctgatcgagcggcgcttcaccagcgaggacaagagccgc
cgccaggtgctgttctcgaccgatctcgtctacgacgtcctgcgaaagcaccaggccgat
cacgtgttgctgcgcgccgcccgtgccgatgccgccaccggcctgctcgacctgcgccgt
ctcggcgccatgcttgcccgcatccagggccgtatcacccatcgggaactcgatcacgtc
tcgccgctcgccgtccccgtgatgctggaaatcggccgcgagtcagtttatggcgaagct
ggcgacgagctgctggcggaagccgccgatgagcttgtcaaagaggcgatgggataa

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