Bradyrhizobium japonicum E109: RN69_05935
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Entry
RN69_05935 CDS
T03509
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bjp
Bradyrhizobium japonicum E109
Pathway
bjp00300
Lysine biosynthesis
bjp01100
Metabolic pathways
bjp01120
Microbial metabolism in diverse environments
bjp01230
Biosynthesis of amino acids
Module
bjp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RN69_05935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bjp01002
]
RN69_05935
Enzymes [BR:
bjp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RN69_05935
Peptidases and inhibitors [BR:
bjp01002
]
Metallo peptidases
Family M20
RN69_05935
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AJA60004
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All DBs
Position
complement(1294222..1295388)
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AA seq
388 aa
AA seq
DB search
MTDALSIARDLIRCPSVTPADAGALGVLEQALNAVGFTCHRVTFSEPGTADVDNLYARIG
TEGPHITFAGHTDVVPPGDENAWSVGAFSGEVKDGFLHGRGAVDMKGGIACSVAAVLEHL
AANGGTPRADGKGSISFLITGDEEDVSINGTIKLLKWAAERGEKFDHCVLGEPSNVETLG
DTIKVGRRGSQSGTLYVDGVQGHVAYPHRASNPVPDISRLIVAISDEPLDHGSAQFQASN
LEFTSVDVGNKANNVIPGEARAKFNIRYNDNHTQASLRELVETRLTKACGNRIKARIVWE
PSNSNVFVTKPGPFTDLAVSAIEEVTGRKPELSTSGGTSDARFISSYCPVIEFGLVGQTM
HQVDERVPVVDLERLTQVYRGILTRYFG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgctctctcgattgcccgcgatctcatccgctgcccctcggtaactccggcc
gatgccggtgcactcggggtgcttgaacaagccctgaacgccgtcggcttcacctgccac
cgcgtgaccttcagcgaaccaggcacagccgacgtcgacaatctctatgcgcggatcggc
actgaaggcccgcacatcaccttcgccggccacaccgacgtggtgccgcccggcgacgag
aacgcctggagcgtcggcgcgttctcgggcgaggtgaaggacggctttctgcacggccgc
ggcgcggtcgacatgaagggtggcatcgcctgctcggtggcagccgtgctcgagcatctc
gcagccaacggcggcacgccgcgggccgatggaaagggctcgatctcgttcctgatcact
ggcgacgaggaagacgtctccatcaacggcaccatcaagctgctgaaatgggccgcggag
cgcggcgaaaagttcgaccattgcgtgctcggcgaaccctccaatgtcgagacgctcggc
gacaccatcaaggtcggccgccgcggctcgcaatccggtacgctctatgtcgacggcgtg
cagggccatgtggcctatccgcaccgcgcgtccaatccggtgcctgatatctcgcggttg
atcgtggcgatcagtgacgagccgctcgaccatggcagcgcgcagttccaggcctccaat
ctcgaattcacctcggtggacgtcggcaacaaggccaacaacgtcatccccggcgaggcc
cgcgcaaaattcaacatccgctacaatgacaaccacacccaggcatccttgcgcgagctg
gtcgagacccgcctgacgaaagcctgcggcaaccgcatcaaggcccgcatcgtctgggag
ccctcgaactcgaacgtgttcgtgaccaagcccggcccgttcaccgacctcgcggtctcc
gcgatcgaggaggtgacgggacgcaagccggaactgtcgacctcgggcggcacctcggac
gcgcgcttcatctccagctactgtccggtgatcgaattcggcctggtcggccagaccatg
caccaggtcgacgagcgcgtgccggtggtggatctggagagattgactcaggtgtatcgg
ggaattttgacgcggtattttgggtaa
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