Bradyrhizobium japonicum E109: RN69_11175
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Entry
RN69_11175 CDS
T03509
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bjp
Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bjp01002
]
RN69_11175
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bjp01011
]
RN69_11175
Peptidases and inhibitors [BR:
bjp01002
]
Cysteine peptidases
Family C82
RN69_11175
Peptidoglycan biosynthesis and degradation proteins [BR:
bjp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RN69_11175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AJA60881
LinkDB
All DBs
Position
complement(2379263..2381476)
Genome browser
AA seq
737 aa
AA seq
DB search
MRDCLNHRAGFDRVLMTVAATFLTVSASSALAQDQARSSAAELAIEAAIPRPEPANVPPP
TASDIKLDTTATVQDSAKEPTKEPVKAEAAPGPDKVETKPSDVATTPASEAPKSETAKSE
PAKTEPAKSEPAKADTATATPAAPAAPAAAPAAEPVKAASNVPAADQPVADKLKDIIGAK
TSRHFDRKNERAAIEKFYGARDFAPVWTQAGSLTAAAKGVIARLKDAASDGLNPADYPVP
DFAAATTPDALADAELKLTASMFDYARQAQSGRMHWSQVSGDILYPEHPVDPNEVLAKVT
TAADASAALDSYNPPQKLYKELKAKLAELRGLGSGPVIEIADGPALKYTPAGKKQAEIVV
EDPRVPQLRAKLGLAENAGDTRYDATVAEAVRKFQSGAEMKVTGILDDKTVKAINTPKRD
KQIDTVLVNMERWRWLPRDLGVPSLGDAYVILNIPDYTLKVMQRGQQVWTTRVVTGKPGT
HATPLLTETMKYITVNPTWNVPPSIVYNEYLPALQQDPTVLQRMGLKLEQNRDGSVHISQ
PPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAKEDRAFSHGCMRVQNPDQYASILLNIA
MPNEKYTPERVRSMYGKSEIDLKFPTPIPVNITYQTAFVDDAGKLQIRKDVYGRDATMIN
ILKNGRGKDLENVVAHSQPSYSRPATTLPSGVAIANNGGGFGSSGPNFFERLFGAPALAP
PPAPVGRRPQQQRVFTR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgactgtttgaaccaccgtgcgggctttgaccgcgtcttgatgacggtcgcggcg
accttcctcacggtatcggccagctcggccctggcgcaggatcaggcgcgcagcagcgcc
gccgaactcgccatcgaagccgcgatcccgcgccccgagcccgccaacgtcccgcccccg
accgcatccgacatcaagctcgacaccaccgcgacggttcaggactccgcaaaggagccg
accaaggaaccagtgaaggccgaagccgcaccgggccccgacaaggtcgagaccaagcct
tccgacgtcgccaccacgcctgcatctgaggcgccgaagagcgaaaccgccaagtccgag
cccgcgaagaccgagcccgccaaatccgaaccggcaaaggccgacaccgcgacggcaacg
ccagccgcgcctgcggcccccgctgcggctccggccgccgagccggtgaaggccgcgagc
aacgttcccgccgccgaccagccggtcgccgacaagctcaaggacatcatcggcgccaag
acctcgcgccatttcgaccgcaagaacgagcgcgccgcgatcgagaagttttacggtgca
cgcgacttcgcgccggtctggacccaggccggcagcctgaccgccgcggccaagggcgtg
atcgcgcggctgaaggatgcggcctccgatggcctcaatcccgccgactatccggtgccg
gatttcgccgccgccacgacgcccgatgcgctcgccgatgccgagctgaagctcaccgcc
agcatgttcgactatgcgcgccaggcccagagcggccgcatgcactggtcgcaggtcagc
ggcgacatcctctatcccgagcatccggtcgatccgaacgaggtgctcgccaaggtcacg
accgcagccgacgcctccgcagcgctcgacagctacaacccgccgcagaagctctacaag
gagctgaaggccaagctcgccgaactgcgcggcctgggcagcggcccggtgatcgaaatc
gccgacggtccggcgctgaaatacaccccggccggcaagaagcaggctgaaatcgtcgtt
gaagatccgcgcgtgccgcagctccgcgccaagctcggcctcgccgagaacgccggcgac
acccgctatgacgccaccgtcgccgaagccgtgcgcaaattccagagcggcgccgagatg
aaggtaacaggcatcctcgacgacaagaccgtcaaggcgatcaacaccccgaagcgcgac
aagcagatcgacacggtgctggtgaacatggagcgctggcgctggctgccgcgcgacctc
ggcgtcccctcgttgggcgatgcctatgtcatcctcaacattcccgactacacgctgaag
gtgatgcagcgcggccagcaggtctggaccacccgcgtcgtcaccggcaagccgggcacg
catgcgacgccgctgctcaccgagacgatgaagtacatcacggtcaatccgacctggaac
gtgccgccgtcgatcgtctacaacgaatacctcccggcgcttcagcaggacccgacggtg
ctccagcgcatgggcctcaagctcgagcagaaccgtgacggctccgtgcacatctcgcag
cccccgggtgaggccaacgcgctcggccgcattcgcttcaacttcccgaacaagttcctg
gtctatcagcacgacacgccggacaagaacctgttcgccaaggaagatcgcgccttcagc
catggctgcatgcgcgtgcagaatccggatcagtacgcctcgattctgctcaacatcgcc
atgccgaacgagaagtacacgccggagcgcgtgcgcagcatgtacggcaagagcgagatc
gacctgaaattcccgacgccgatcccggtcaacatcacctaccagaccgcgttcgtggac
gatgccggcaagctgcaaatccgcaaggacgtctatggccgtgacgcgaccatgatcaac
atcctgaagaacggtcgcggcaaggacctcgagaacgtcgtcgcacactcccagccgagc
tattcgcgcccggcgacgacgctgccctcgggcgtggcgatcgccaacaatggcggcggc
ttcggctcgtcgggtccgaacttcttcgagcggctgttcggggccccggccctggccccg
ccgccggctccggtcggccggcggccgcagcagcagcgggtgtttacccgctga
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