Bradyrhizobium japonicum E109: RN69_12915
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Entry
RN69_12915 CDS
T03509
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
bjp
Bradyrhizobium japonicum E109
Pathway
bjp00500
Starch and sucrose metabolism
bjp01100
Metabolic pathways
bjp01110
Biosynthesis of secondary metabolites
Module
bjp_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RN69_12915
Enzymes [BR:
bjp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RN69_12915
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
AJA61173
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Position
complement(2744724..2746802)
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AA seq
692 aa
AA seq
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MRLTAGSPARLGASWDGRGTNFALFSANAQKVELCLFDTQGRRELERVELPERTEDVWHG
YLNDISPGQLYGYRVHGPYEPEHGHRFNANKLLLDPYAKRLAGRLVWSDAHFAYRTGSPR
EDLSFDRRDNARGMPKAVVVDETFNWGRREIRPNIPWEDTVIYEAHVKGLTQKRDDVPPN
LRGTYGGLSSPAMIEHLKTLGVTTVELLPIHSFIDDRILVEKKLANYWGYNTLSFFAPEP
RYAQDNALDSFRTTVARLHDAGIEVMLDVVYNHTAEGNHLGPTLCYRGIDNASYYWLNRE
NPRYYDDFTGCGSSVNLTHPRVLQMVMDSLRYWVEVCHVDGFRFDLATTLARGPNGYDRG
SSFLTAIRQDPVLAAVKLVAEPWDLGLGGYQVGAFPSQWSEWNDRYRSAMRRYWSGEGSL
IGDISSRMTASSDLFNHDGRRPRASINHITVHDGFTLADLFSYNEKHNEANGEDNRDGSS
DNHSNNCGVEGPTDDPEILGLRRQLRKNVLACLMLAQGVPLILAGDEVGNSQSGNNNAYC
QDNEVGWVGWDNLGKDGDDMVDFVAGLAEIRRRFSQLRSHRWLDGRPKDGASYGALWLTP
AGDEMTESDWKFPEGRFLSYVMGPMEPGSAAIFIVLNAAPEEIAFKLPKMAEYKSWQQIL
NTTDARPNSVDLQPGSDSKAPPRSVLAFAGAL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgactgccggatcgcccgcacgcctcggcgcaagctgggacggacgcggcacc
aatttcgcgctgttctccgccaatgcgcagaaggtcgagctgtgtctgttcgacacgcaa
ggaaggcgcgagctcgagcgtgtcgagctgcccgagcggaccgaggatgtctggcacggc
tatctcaacgacatctcgccgggccagctctacggctatcgcgtgcacggcccctacgag
cccgagcacggccaccgcttcaacgccaacaagctgctgctcgacccctacgccaaacgg
ctcgccgggcggctggtctggagcgatgcccatttcgcctatcgcaccggctcaccgcgc
gaggacctctccttcgaccggcgcgacaacgcgcgcggcatgcccaaggcggtcgtcgtc
gacgagaccttcaactggggccgtcgcgagatccggcccaacatcccctgggaggacacc
gtcatctacgaggcccacgtcaagggcctgacgcagaagcgcgacgacgtgccgccgaat
ttgcgcggcacctatggcggcctgtcgtcgccggcgatgatcgagcatctgaaaacgctc
ggcgtcaccaccgtcgagctgcttccgatccacagcttcatcgacgaccgtattctggtc
gagaagaagctcgccaactactggggctacaacacgctgtccttcttcgcgcccgagccg
cgctatgcccaggacaatgcgctcgattccttccgcaccacggtcgcgcgcctgcacgat
gccggcatcgaggtgatgctcgacgtcgtctacaaccacacggccgaaggcaatcacctc
ggtccgaccctgtgctaccgcggcatcgacaatgcctcctattactggctgaatcgcgag
aacccgcgctattacgacgacttcaccggctgcggctcgtcggtgaacctcacccatccg
cgcgtgctccagatggtgatggattcgctgcgctactgggtcgaggtctgccatgtcgac
ggcttccgcttcgacctcgccaccacgctcgcgcgcggaccgaacggctatgatcgcggc
agctcgttcctgacggcgatccggcaggacccggtgctggcggcggtgaagctcgtcgcc
gaaccctgggatctcgggctcggcggctaccaggtcggcgcattcccttcccaatggtcg
gagtggaacgatcggtatcgcagcgccatgcgtcgctactggagcggcgaaggcagcctg
atcggcgatatctcgagccgcatgacggcctcatccgacctgttcaaccatgacggacgg
cgaccgcgcgccagcatcaaccacatcacggtgcatgacggcttcacgctcgccgacctc
ttcagctacaacgagaagcacaacgaggccaatggcgaggacaatcgcgacggctccagc
gacaaccacagcaacaattgcggtgtcgagggtccgaccgacgatcccgagattctcggg
ctgcggcggcagcttcgcaagaacgtgctggcctgcctgatgctggcgcagggcgttccg
ctgatcctggccggcgacgaggtcggcaattcgcagtccggcaacaacaacgcctattgc
caggacaacgaggtcggctgggtcggctgggacaatctcggcaaggacggcgacgacatg
gtcgatttcgtcgccgggctcgcggagatccgccgccgcttctcgcagcttcgcagccat
cgctggctcgacggccggcccaaggacggcgcttcctacggcgcgctgtggctgacgccc
gccggcgacgagatgacggagagcgactggaaattcccggaagggcggttcctctcctat
gtgatggggccgatggaaccggggagcgccgcgatctttatcgtactgaacgccgccccc
gaagagatcgcattcaaattgcccaaaatggccgagtacaaaagctggcagcagatcctg
aataccaccgatgccaggccgaacagtgttgatttacagcccggaagcgacagcaaggcg
ccgccgcgctccgtgctcgccttcgcgggggcgctatga
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