Bradyrhizobium japonicum E109: RN69_21720
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Entry
RN69_21720 CDS
T03509
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bjp
Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bjp03400
]
RN69_21720
Enzymes [BR:
bjp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RN69_21720
DNA repair and recombination proteins [BR:
bjp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RN69_21720
Prokaryotic type
RN69_21720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AJA62659
LinkDB
All DBs
Position
complement(4583780..4585225)
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AA seq
481 aa
AA seq
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MTTPSAPPVIVWFRDDLRLSDHPALHAAAKTGAPVICLYVMDEMAGRAPGGATRWWLAQS
LRALGAETATRGGSLILRKGPAAKVIPEVARESGAAMVYWNGVAQAPHQSVEKQLEAALA
KLGVDSQSFPGDLLVPPSAIRNKEGRGLRVFTPFWRRVVSLGDPPKPLPAPRELRPAPPL
AGDALESWTLEPTKPDWAGGLRQTWTPGEASARMRLRDFLRHTARVYVGDRDRPDREGTS
SLSPHLRFGELSPRQVWHAARFAAAENPAIGPGVEKFLSELGWREFCRHLLHDHPSLATE
NLQTNFDGFPWKGDKKALAAWQRGRTGYPIVDAGLRELWHTGVMHNRVRMVVASFLVKHL
LIDWRDGESWFWDTLVDADAGSNPANWQWVAGCGADAAPYFRVFNPTLQGEKFDPDGAYV
RRWVPELKDVPAKLIHQPWQASPIELASAGVTLGKTYPQPIVDHAKGRERALAAYAKIRK
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ctgaccacgccaagcgcgccgcccgtcatcgtctggttccgcgatgacctccgcctgtcc
gaccatcccgccctccatgctgcggcgaagacaggcgcgccggtgatctgcctctatgtg
atggatgagatggccggacgggcgccgggcggcgcgacgcgctggtggctggcgcagtcg
ctgcgggcgctcggcgccgagaccgccacgcgcggcggatccctgatcctgcgcaagggg
ccggcggccaaggtgatccccgaagtggcgcgcgagagcggcgccgcaatggtctactgg
aacggggtcgcgcaggcgccacatcagtccgtcgagaaacagctcgaagcggcgctggca
aagctcggcgtggactcgcagagcttccctggcgacttgctggtgccaccctcggcgatc
cgcaataaggagggccgcggccttcgcgtcttcacgccgttctggcggcgggtggtgtcg
ctgggcgatccgcccaagcctctgcccgcaccgcgggagctacgccctgcgccgccgctc
gccggcgacgcgctggagagctggacgctcgagccgacaaagcccgactgggctggcggc
ctgcgccagacctggacgccgggcgaagcctcggcccgcatgcgcctccgcgacttcctg
aggcacaccgcgcgcgtctatgtcggcgatcgcgaccgtcccgatcgcgaggggacttca
agcctgtcgcctcacttgaggttcggcgagctcagcccgcgccaggtctggcacgccgcg
cgctttgccgcagcggagaatcccgcgatcgggcccggcgtcgaaaagttcctgagcgag
ctcggctggcgcgaattctgccgccacctcctccacgatcacccgagccttgccaccgaa
aacctgcaaacgaatttcgatggctttccctggaagggagacaagaaggcgctcgccgcc
tggcaacgcggacgcaccggctatcccatcgtcgacgccggcctgcgcgagctctggcac
accggcgtgatgcacaaccgggtgcggatggtggtggcgtccttcctggtcaagcatctc
ctgatcgactggcgcgatggcgagagctggttctgggacacgctggtcgatgcggatgcc
ggcagcaatcccgccaactggcaatgggtcgccggctgcggcgccgacgccgcgccctat
ttccgcgtgttcaatccaactctccagggcgagaagttcgaccctgatggagcctatgtc
cggcgctgggtgcccgagctgaaagacgtgccggccaagctgatccaccagccctggcag
gcatcaccgatcgagcttgcgagcgcgggcgtcacgctcggcaagacctatccgcagccg
atcgtcgatcacgccaaggggcgcgagcgcgcgctcgccgcctacgcaaagatccgcaaa
ggttga
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