Bradyrhizobium japonicum E109: RN69_23930
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Entry
RN69_23930 CDS
T03509
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
bjp
Bradyrhizobium japonicum E109
Pathway
bjp00541
Biosynthesis of various nucleotide sugars
bjp01100
Metabolic pathways
bjp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RN69_23930
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bjp01005
]
RN69_23930
Enzymes [BR:
bjp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RN69_23930
Lipopolysaccharide biosynthesis proteins [BR:
bjp01005
]
Lipid A
RN69_23930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AJA63042
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Position
5031974..5032825
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AA seq
283 aa
AA seq
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MSSSNSAAPVVTIGTVKFGNDLPISIIAGPCQLESRQHALEVASALKEIAARLKIGLVYK
TSFDKANRTSASAARGLGLAQSLPIFAEIRASLGLPVLTDVHDAAQCAEVAQAVDILQIP
AFLCRQTDLLLAAAATGKVVNVKKGQFLAPWDMANVVTKITTANNPNVLVTERGASFGYN
TLVSDMRALPILARTTGAPVIFDATHSVQQPGGKGTSSGGEREFVPVLARAAVAVGVAGV
FIETHPDPDRAPSDGPNMVPLREFEGLIRTLMAFDAVTKSTTR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgagctcttcgaattcagcagcgccggtcgtcaccattggcacggtcaagttcggcaat
gatctgccgatctcgatcattgccgggccgtgccagctcgaaagccgccagcacgcgctg
gaggtggcctccgcgctgaaggagatcgccgcgcggctgaagatcggcctcgtctacaag
acctcgttcgacaaggccaaccgcaccagcgcgtcggcagcgcgcggtctcgggctcgca
cagtcgctgccgatcttcgccgagatccgcgcctccctcggcttgccggtcctgaccgac
gtgcatgacgccgcgcagtgcgccgaggtggcgcaagccgtggacatcctccagatcccg
gccttcctgtgccgacagaccgatctgctgctggcggccgccgcgacgggcaaggtcgtc
aacgtcaagaaggggcaattcctcgcgccctgggacatggccaatgtcgtgaccaagatc
acgaccgcgaacaatcccaacgtgctcgtcaccgagcgcggcgcctcgttcggctacaac
acgctggtctccgacatgcgcgcgctgccgatcctggcgcgcacgaccggcgcgcccgtg
atcttcgacgccacccattcggtgcagcagccgggcgggaaggggacgtcctcgggcggc
gagcgtgaattcgtgccggtgctggcccgtgcagccgtcgcggtcggcgttgccggcgtc
ttcatcgagacccatcccgaccctgatcgcgcgccctcggacgggcccaacatggtgccg
ctgcgcgagttcgaagggctgatccgcacgctgatggcattcgacgcggtgacgaaaagc
acaacgcgctga
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