KEGG   Bradyrhizobium japonicum E109: RN69_24060
Entry
RN69_24060        CDS       T03509                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bjp  Bradyrhizobium japonicum E109
Pathway
bjp00010  Glycolysis / Gluconeogenesis
bjp00020  Citrate cycle (TCA cycle)
bjp00260  Glycine, serine and threonine metabolism
bjp00280  Valine, leucine and isoleucine degradation
bjp00310  Lysine degradation
bjp00380  Tryptophan metabolism
bjp00620  Pyruvate metabolism
bjp00630  Glyoxylate and dicarboxylate metabolism
bjp00640  Propanoate metabolism
bjp00670  One carbon pool by folate
bjp00785  Lipoic acid metabolism
bjp01100  Metabolic pathways
bjp01110  Biosynthesis of secondary metabolites
bjp01120  Microbial metabolism in diverse environments
bjp01200  Carbon metabolism
bjp01210  2-Oxocarboxylic acid metabolism
bjp01240  Biosynthesis of cofactors
Module
bjp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bjp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bjp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bjp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bjp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RN69_24060
   00020 Citrate cycle (TCA cycle)
    RN69_24060
   00620 Pyruvate metabolism
    RN69_24060
   00630 Glyoxylate and dicarboxylate metabolism
    RN69_24060
   00640 Propanoate metabolism
    RN69_24060
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RN69_24060
   00280 Valine, leucine and isoleucine degradation
    RN69_24060
   00310 Lysine degradation
    RN69_24060
   00380 Tryptophan metabolism
    RN69_24060
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RN69_24060
   00670 One carbon pool by folate
    RN69_24060
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bjp04147]
    RN69_24060
Enzymes [BR:bjp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RN69_24060
Exosome [BR:bjp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RN69_24060
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored DAO HI0933_like FAD_binding_3 GIDA Lys_Orn_oxgnase AlaDh_PNT_C 3HCDH_N Thi4 2-Hacid_dh_C NAD_binding_7 Lycopene_cycl
Other DBs
NCBI-ProteinID: AJA63063
UniProt: A0A1Y2JCN6
LinkDB
Position
5060222..5061643
AA seq 473 aa
MADTSFDVIIIGSGPGGYVTAIRAAQLGFKVAIVEKSYLGGICLNWGCIPTKALLRSAEI
YHYMQHAKDYGLSAEKVSFDPKAVVQRSRGVSKRLNDGVGFLMKKNKVSVIWGAASIDAP
GKVTVKKSDVEGPKGALGEGSYQAKHIIIATGARPRVLPGLEPDKKLIWTYFEAMVPEKM
PKSLLVVGSGAIGIEFASFFHTMGSEVTVVEVLPQILPVEDAEIAGLARKRLEKQGIKIM
SSTKVTKLEKKADSVVATIDDGKGKPVTTEFERVISAVGVVGNIENLGLEKLGVKTDRGC
IVIDGYGKTNVPGIYAIGDVAGPPMLAHKAEHEGVICVEAIKGLHPHPMDKNLIPGCTYC
QPQVASVGLTEAKAKESGREIRVGRFPFVGNGKAIALGEDQGLVKVIFDKKTGQLLGAHM
VGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEMMKEAVLDAYGRVLNI
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggccgatacatccttcgacgtcatcatcatcggctctggccccggcggctatgtcacc
gcgatccgcgccgcccagctcggtttcaaggtcgcgatcgtcgagaagtcctatctcggc
ggcatctgcctgaactggggctgcatcccgaccaaggcgctgctgcgctccgccgagatc
taccactacatgcagcacgccaaggattacggcctgtcggcggaaaaggtctcgttcgac
ccgaaggcggtggtgcagcgttcgcgcggcgtctcgaagcggctgaacgacggcgtcggc
ttcctgatgaagaagaacaaggtcagcgtgatctggggcgcggcctcgatcgacgcgccc
ggcaaggtcaccgtgaagaagtccgacgtcgagggcccgaagggtgcgctgggcgagggg
agctaccaggccaagcacatcatcattgcaaccggtgcgcggccgcgcgtgctgcccggg
ctcgagcccgacaagaagcttatctggacctatttcgaagcgatggtcccggagaagatg
ccgaagtcgctgctggtcgtcggctcaggcgcgatcggcatcgagttcgcctcgttcttc
cacaccatgggctccgaggtcaccgtggtcgaggtgctgccgcaaatcctgcccgtcgag
gacgccgagattgcaggcctcgcccgcaagcgcctcgagaagcagggcatcaagatcatg
tcctcgaccaaggtcacgaagctggagaagaaggccgacagcgtcgtcgccaccatcgac
gacggcaagggcaaacccgtcaccaccgagttcgagcgcgtgatctcggcggtcggcgtc
gtcggcaatatcgagaatctcggcctcgaaaagctcggtgtcaaaacggatcgcggctgt
atcgtcatcgacggctacggcaagaccaacgtccccggcatctacgccatcggcgacgtc
gccggtccccccatgctggcgcacaaggccgagcatgaaggcgtgatctgcgtcgaggcc
atcaagggcctgcatccgcatcccatggacaagaacctgatcccgggctgcacctattgc
cagccgcaggtcgcctccgtcggcctcaccgaagccaaggccaaggagagtggccgagag
atccgcgtcggccgtttcccgttcgtcggcaacggcaaggcgattgcgctcggcgaagac
cagggtctcgtcaaggtgatcttcgacaagaagaccggccagctcctcggcgcccacatg
gtcggtgccgaagtcaccgagctgatccagggctacgtcgtcgcgatgaacctggagacg
accgaagaagagctgatgcacacggtgttcccgcatccgaccctgtcggagatgatgaag
gaagccgtgctcgatgcgtatggaagggtgttgaatatttga

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