KEGG   Bradyrhizobium japonicum E109: RN69_25580
Entry
RN69_25580        CDS       T03509                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
bjp  Bradyrhizobium japonicum E109
Pathway
bjp02024  Quorum sensing
bjp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bjp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RN69_25580
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RN69_25580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bjp03019]
    RN69_25580
   03036 Chromosome and associated proteins [BR:bjp03036]
    RN69_25580
Messenger RNA biogenesis [BR:bjp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RN69_25580
Chromosome and associated proteins [BR:bjp03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    RN69_25580
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: AJA63323
UniProt: A0A0A3XRY1
LinkDB
Position
complement(5382407..5382655)
AA seq 82 aa
MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGAPIQLFEGGEDQPA
NT seq 249 nt   +upstreamnt  +downstreamnt
atggcggcagaccgcgcacaaaacctacaggacaccttcctcaatcacgttcgcaaaacc
aagacgccactgacgatctttctggtcaacggagtgaagctccagggcatcgtgacctgg
ttcgacaatttctgtttgctgcttcggcgcgacggtcactcgcagcttgtctacaagcat
gcgatctcgaccatcatgccgggcgctccgatccagttgttcgaaggcggcgaggatcag
ccggcttga

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