Bradyrhizobium japonicum E109: RN69_25580
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Entry
RN69_25580 CDS
T03509
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
bjp
Bradyrhizobium japonicum E109
Pathway
bjp02024
Quorum sensing
bjp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RN69_25580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RN69_25580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjp03019
]
RN69_25580
03036 Chromosome and associated proteins [BR:
bjp03036
]
RN69_25580
Messenger RNA biogenesis [BR:
bjp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RN69_25580
Chromosome and associated proteins [BR:
bjp03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RN69_25580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AJA63323
UniProt:
A0A0A3XRY1
LinkDB
All DBs
Position
complement(5382407..5382655)
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AA seq
82 aa
AA seq
DB search
MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGAPIQLFEGGEDQPA
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaccgcgcacaaaacctacaggacaccttcctcaatcacgttcgcaaaacc
aagacgccactgacgatctttctggtcaacggagtgaagctccagggcatcgtgacctgg
ttcgacaatttctgtttgctgcttcggcgcgacggtcactcgcagcttgtctacaagcat
gcgatctcgaccatcatgccgggcgctccgatccagttgttcgaaggcggcgaggatcag
ccggcttga
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