Bradyrhizobium japonicum E109: RN69_26020
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Entry
RN69_26020 CDS
T03509
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
bjp
Bradyrhizobium japonicum E109
Pathway
bjp00280
Valine, leucine and isoleucine degradation
bjp00650
Butanoate metabolism
bjp00907
Pinene, camphor and geraniol degradation
bjp01100
Metabolic pathways
bjp01120
Microbial metabolism in diverse environments
bjp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RN69_26020
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RN69_26020
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RN69_26020
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RN69_26020
Enzymes [BR:
bjp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RN69_26020
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Aldolase_II
Motif
Other DBs
NCBI-ProteinID:
AJA63397
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Position
complement(5485801..5486712)
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AA seq
303 aa
AA seq
DB search
MSDPVRIIEMGPRDGLQNEKTPVSVEARIAFIEALVAAGLTTVEVGAFVSPRAIPQMASS
DAVLRGVSHVNGAEFHVLVPNEKGYDAARAAGAQVVSVFAAASEGFSRANINCTVAESIE
RFKPVLARAKADGVRVRGYISCVLGCPFDGEIKPKAVADLANTLWELGCYEISLGDTIGV
GTPDKAKEMLRAVSANIPPAKLAMHFHDTYGQALANLYAGLEEGVRVIDAAAGGLGGCPY
APGATGNVATEDVVYMLEGMGIRTGVDMDKLLAATNEMSGVLGKPPVSRVASALNAKKKR
AAS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatccggtccgcatcatcgaaatggggccgcgcgacggcctccagaacgagaag
acgcccgtcagcgtcgaggcccgcatcgccttcatcgaggcgctcgtagccgctggcctc
accacggtcgaggtcggcgccttcgtctcgccaagggcgatcccgcaaatggcgagttcc
gatgccgtgctacgcggtgtcagccacgtcaacggcgccgaattccacgtgctcgtgccg
aacgagaagggctacgacgccgcgcgcgctgccggcgcgcaagtcgtctcggtgttcgcg
gcggcgtcggaaggcttttcgcgcgccaatatcaactgcacggtcgcggagtccatcgaa
cggttcaagccggtgctggcgcgcgccaaggcggatggcgtcagggtccgcggctatatc
tcctgcgtgctgggctgcccgttcgacggcgagatcaagccgaaggcggtcgccgatctc
gccaacacgctgtgggagctcggctgctacgagatctcgcttggcgacaccatcggggtc
ggcacgcctgataaggccaaggagatgctgcgcgcggtcagcgccaacatcccgcccgca
aaactcgcgatgcatttccacgacacctacggccaggcgctcgccaatctttatgccgga
ctggaagagggcgtgcgcgtcatcgacgctgccgccggcggccttggcggctgcccctac
gcgccgggcgcgaccggcaacgttgcgaccgaggacgtcgtctacatgctcgaaggcatg
ggcatcaggaccggcgtcgacatggacaagctgctggcggccacgaacgagatgagcggc
gtgctgggcaagccgcctgtgagccgcgtagcctccgcgctgaacgcgaagaagaagcgc
gcggcctcctaa
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