KEGG   Bacillus sp. JS: MY9_1842
Entry
MY9_1842          CDS       T02027                                 
Name
(GenBank) phosphodiesterase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bjs  Bacillus sp. JS
Pathway
bjs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bjs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MY9_1842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bjs03019]
    MY9_1842
Messenger RNA biogenesis [BR:bjs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MY9_1842
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 PFF1_TM
Other DBs
NCBI-ProteinID: AFI28379
LinkDB
Position
1813945..1815507
AA seq 520 aa
MTPIMMVLISILLILLGLVVGYFVRKTIAEAKIAGARGAAEQILEDAKRDAEALKKEALL
EAKDEIHKLRIDAEQEVRERRNELQKQENRLLQKEENLDRKHEGIDKREAMLEKKDHSLN
ERQQHIEEMESKVDEMIRMQQSELERISSLTRDEAKQIILERVENELSHDIAIMTKETEN
RAKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDDYIR
EMGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAFLAGLMASELGEDAKL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDEEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDSIN
DLEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgaccccaattatgatggttctcatctccattttgctgattctactcggtttagttgtt
ggctactttgttcgtaaaaccattgccgaagcgaaaattgcgggcgcacgcggtgcagcc
gagcaaattcttgaagatgcaaagcgtgatgctgaagcactgaaaaaagaagctctgctt
gaagcaaaggatgaaatccacaaacttcgaatagatgctgaacaggaagttcgtgaaaga
cgaaatgagcttcaaaaacaagaaaaccgtttactccaaaaggaggaaaaccttgatcgc
aaacatgagggaattgataaacgggaagcgatgttggagaagaaagatcattctctgaat
gaacgacaacaacatattgaagagatggaaagcaaagtggatgagatgattcgtatgcag
cagtcagagttggaacgaatttcgagtctgactcgtgatgaagcaaagcaaatcattctt
gagcgggttgaaaacgagctttcacatgacatcgccatcatgacaaaagaaactgaaaac
cgtgcgaaagaagaggcggataagaaagcgaaaaacattctttcactcgccttacagcgc
tgcgcagcggaccacgttgccgaaacaacggtatcagttgtcaatcttccaaatgatgag
atgaaaggacgtatcatcggacgggaagggcgtaacattcgtacgcttgaaacgctgaca
ggaattgacctgattattgatgatacacctgaagctgtcattctttccggatttgatccg
atcagacgtgagacagccagaattgctcttgataaactcgttcaggatggccgaattcat
ccggcacggattgaagaaatggttgaaaaatctcgtcgcgaggtcgatgactatattcgt
gagatgggtgaacagacgacatttgaggttggcgttcacggcctccacccagatctcatc
aagatcctcggccgcttaaagttccgtacaagctacggtcaaaatgtgcttaagcattcc
atggaagtcgcattcttggccggtctaatggcatcggagcttggtgaagacgcaaagctt
gccaaacgtgcgggtcttcttcacgacatcgggaaagcaattgaccatgaagtagaagga
agccacgttgaaatcggggtagagcttgcgaccaaatataaagagcacccagtcgtgatt
aacagtattgcatcacaccacggggatgaggagccgacttccattatcgctgtgctggtc
gctgcagcagatgcgctttccgctgcaaggcctggtgcgagaagtgagacgctcgagaat
tatattcgaagacttgaaaaactcgaagaaatttctgagtcctacgaaggtgttgaaaaa
tcatttgccattcaggctggacgcgaagtgcgcattatggtgaagccggattcaattaat
gatcttgaagctcatcgactggcgcgagatatccgcaagcgaattgaggacgagctcgat
tatccaggtcatattaaggtgactgtaatcagagaaactcgtgccgtagagtatgcaaaa
taa

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