Bacillus sp. JS: MY9_1842
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Entry
MY9_1842 CDS
T02027
Name
(GenBank) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY9_1842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjs03019
]
MY9_1842
Messenger RNA biogenesis [BR:
bjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MY9_1842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
PFF1_TM
Motif
Other DBs
NCBI-ProteinID:
AFI28379
LinkDB
All DBs
Position
1813945..1815507
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AA seq
520 aa
AA seq
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MTPIMMVLISILLILLGLVVGYFVRKTIAEAKIAGARGAAEQILEDAKRDAEALKKEALL
EAKDEIHKLRIDAEQEVRERRNELQKQENRLLQKEENLDRKHEGIDKREAMLEKKDHSLN
ERQQHIEEMESKVDEMIRMQQSELERISSLTRDEAKQIILERVENELSHDIAIMTKETEN
RAKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDDYIR
EMGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAFLAGLMASELGEDAKL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDEEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDSIN
DLEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaattatgatggttctcatctccattttgctgattctactcggtttagttgtt
ggctactttgttcgtaaaaccattgccgaagcgaaaattgcgggcgcacgcggtgcagcc
gagcaaattcttgaagatgcaaagcgtgatgctgaagcactgaaaaaagaagctctgctt
gaagcaaaggatgaaatccacaaacttcgaatagatgctgaacaggaagttcgtgaaaga
cgaaatgagcttcaaaaacaagaaaaccgtttactccaaaaggaggaaaaccttgatcgc
aaacatgagggaattgataaacgggaagcgatgttggagaagaaagatcattctctgaat
gaacgacaacaacatattgaagagatggaaagcaaagtggatgagatgattcgtatgcag
cagtcagagttggaacgaatttcgagtctgactcgtgatgaagcaaagcaaatcattctt
gagcgggttgaaaacgagctttcacatgacatcgccatcatgacaaaagaaactgaaaac
cgtgcgaaagaagaggcggataagaaagcgaaaaacattctttcactcgccttacagcgc
tgcgcagcggaccacgttgccgaaacaacggtatcagttgtcaatcttccaaatgatgag
atgaaaggacgtatcatcggacgggaagggcgtaacattcgtacgcttgaaacgctgaca
ggaattgacctgattattgatgatacacctgaagctgtcattctttccggatttgatccg
atcagacgtgagacagccagaattgctcttgataaactcgttcaggatggccgaattcat
ccggcacggattgaagaaatggttgaaaaatctcgtcgcgaggtcgatgactatattcgt
gagatgggtgaacagacgacatttgaggttggcgttcacggcctccacccagatctcatc
aagatcctcggccgcttaaagttccgtacaagctacggtcaaaatgtgcttaagcattcc
atggaagtcgcattcttggccggtctaatggcatcggagcttggtgaagacgcaaagctt
gccaaacgtgcgggtcttcttcacgacatcgggaaagcaattgaccatgaagtagaagga
agccacgttgaaatcggggtagagcttgcgaccaaatataaagagcacccagtcgtgatt
aacagtattgcatcacaccacggggatgaggagccgacttccattatcgctgtgctggtc
gctgcagcagatgcgctttccgctgcaaggcctggtgcgagaagtgagacgctcgagaat
tatattcgaagacttgaaaaactcgaagaaatttctgagtcctacgaaggtgttgaaaaa
tcatttgccattcaggctggacgcgaagtgcgcattatggtgaagccggattcaattaat
gatcttgaagctcatcgactggcgcgagatatccgcaagcgaattgaggacgagctcgat
tatccaggtcatattaaggtgactgtaatcagagaaactcgtgccgtagagtatgcaaaa
taa
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