Bacillus sp. JS: MY9_2313
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Entry
MY9_2313 CDS
T02027
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY9_2313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjs03019
]
MY9_2313
03400 DNA repair and recombination proteins [BR:
bjs03400
]
MY9_2313
Enzymes [BR:
bjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY9_2313
Messenger RNA biogenesis [BR:
bjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MY9_2313
DNA repair and recombination proteins [BR:
bjs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MY9_2313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
DUF6119
Motif
Other DBs
NCBI-ProteinID:
AFI28846
LinkDB
All DBs
Position
complement(2312929..2314419)
Genome browser
AA seq
496 aa
AA seq
DB search
MSRLQQTLHHYFGFTSFKKGQEDIIRSILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVL
IVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVLEHIHRYKFLYLSPEALQSPY
VLEKLKNVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKILGHPPVLALTATATKDTLQ
DVMNLLELQHADQHLNSVNRPNIALRVENAADAAEKIDRVIQLVENLQGPGIVYCPTRKW
AEELAGEIKSKTSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRY
VIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTAEEIADVIR
VLEKTEERDERRLRDVLMQYGAGETQARMMIHLFMQGKTSVELMKKEISYRMELKLEKMR
RVSFLLQREGCLRQSLLTYFDESYEPDAGNFPCCSHCGFDLSLYEQIGERSKRAPLNSWS
SELHRIFSLQTVGELN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagtagattacagcaaacgttacatcattattttggttttacttcctttaaaaaaggg
caggaggacattattagaagtattctcagcgggaaggataccattgcaatgctcccgact
gggggagggaaatcgctttgctaccagctgcctggttatatgcttgacggcatggtatta
atcgtttctccactgctttctttaatggaagatcaggtacagcagctgaaagcccgagga
gaaaagcgtgcggccgctttgaacagcatgcttaacaggcaggaaagacaatttgtttta
gaacatattcatcgctataaatttttgtacttgtcccctgaggccctgcagtctccatat
gtattggaaaaattgaaaaacgtcccgatcagcctatttgttattgatgaagcacattgt
atatctgaatggggccacgacttcaggcctgactattcaaagctcggacaactgagaaaa
atattgggacacccgcccgttttggcattgactgctacggctacaaaggatacgctgcaa
gatgtcatgaacctgctggagctgcagcatgctgaccagcatctcaactcagtcaatcgc
ccgaatatcgcactgagggttgaaaatgcggcggatgcggctgaaaaaatagatagggtc
attcagctggttgaaaacctgcaaggtccgggaattgtttattgtccgacacggaaatgg
gctgaggaattagctggtgaaattaaaagcaaaacaagcagcagagcagacttttaccat
ggcggtttggagtcaggtgacagaattttaattcagcagcagtttattcataaccagctt
gatgtgatatgttgtacgaatgcgtttggaatgggtgtcgataaacctgatatcagatat
gtgattcattttcaccttccgcagacggctgaagcttttatgcaggaaatcggcagagcg
ggccgcgatggaaagccgagtgtcagcattttgctgcgggcgccaggggattttgaattg
caggagcagattatccaaatggagagtgtcacagctgaagaaatcgccgacgtgatccgt
gtgctagagaagacggaggagcgggatgagagaagactgcgtgacgtattaatgcagtat
ggcgccggagagacacaggcccgtatgatgattcatctctttatgcaggggaaaacgtca
gttgaactgatgaagaaagaaatttcataccgcatggagctgaagctggaaaaaatgcgc
cgtgtatcttttctgcttcagcgtgagggctgtttaaggcagtcactgttaacctacttt
gatgaatcgtacgagccagatgccggaaacttcccgtgctgttctcattgcggttttgat
ttatccttgtatgaacaaataggggaacggagtaaaagggcgccattaaacagctggagt
tcggaattgcaccggatattcagcttgcagactgtaggtgagctgaactga
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