Bacillus sp. JS: MY9_2544
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Entry
MY9_2544 CDS
T02027
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bjs
Bacillus sp. JS
Pathway
bjs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MY9_2544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bjs03021
]
MY9_2544
Transcription machinery [BR:
bjs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MY9_2544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
HTH_20
COR
Motif
Other DBs
NCBI-ProteinID:
AFI29077
LinkDB
All DBs
Position
complement(2505982..2507097)
Genome browser
AA seq
371 aa
AA seq
DB search
MADKQTHETELTFDQVKEQLTESGKKRGVLTYEEIAERMSSFEIESDQMDEYYEFLGEQG
VELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAKEE
IAYAQKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDY
RKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPE
EIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYELLK
EQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHP
SRSKRLKDFLE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaaacccacgagacagaattaacattcgaccaagtaaaagagcaatta
acagagtctggtaaaaaacgtggcgttttgacatatgaagaaatcgctgagcgtatgtcc
agctttgaaattgaatcagaccaaatggatgagtattatgaatttttaggtgaacaaggt
gttgaattaattagtgagaatgaagaaacagaagatcctaatattcagcagcttgccaaa
gccgaagaagaatttgaccttaatgaccttagtgtaccgcctggcgttaaaatcaatgac
ccagttcgtatgtatttaaaggaaatcggtcgggttaaccttctatctgcaaaagaagaa
atcgcctacgctcaaaagattgaagaaggtgacgaagaatctaaacgcagattggctgaa
gcgaacctgcggcttgttgtcagtatcgcaaaacggtatgtcggacgcggtatgctgttc
cttgacctgatccaagaaggaaacatgggtctgatgaaagccgttgaaaaatttgattat
cgcaaaggttataaattcagtacgtatgctacgtggtggatcagacaggcgattacacgc
gctattgccgatcaggcgagaacgatccggattcccgttcatatggtggaaaccattaat
aaattaatccgtgtgcagcgtcaattgcttcaagacttaggcagagaaccaacacctgaa
gaaattgcggaagatatggatttaacgcctgaaaaagtacgcgaaatcttaaagattgca
caagagccggtatcactggaaacaccgatcggtgaagaggatgactcacaccttggtgat
tttattgaagaccaagaagcaacttcaccttcagatcacgccgcatacgagctgttaaaa
gagcagctggaagatgtacttgatacgttaactgatcgtgaagaaaatgtattgcgtctt
cgattcggtcttgatgatggccgtacaagaacattagaagaggtcggcaaagtatttgga
gtgacgagagagcgtattcgacaaatcgaagccaaagcgttgcggaaactaagacatcct
agcagaagtaaacgtttgaaagatttcctcgaataa
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