Bacillus sp. JS: MY9_2744
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Entry
MY9_2744 CDS
T02027
Name
(GenBank) single-strand DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03410
Base excision repair
bjs03430
Mismatch repair
bjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MY9_2744
03430 Mismatch repair
MY9_2744
03440 Homologous recombination
MY9_2744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bjs03400
]
MY9_2744
DNA repair and recombination proteins [BR:
bjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MY9_2744
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MY9_2744
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MY9_2744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
tRNA_anti-codon
PGM_PMM_II
Motif
Other DBs
NCBI-ProteinID:
AFI29277
LinkDB
All DBs
Position
complement(2686572..2688932)
Genome browser
AA seq
786 aa
AA seq
DB search
MLASKMRWEIQRPDQDKVKSLTEQLHITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
FEMKGMKEAADRIKQAISQQEQIMIYGDYDADGVTSTSVMLHTLQKLSAQVDFYIPDRFK
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAKVAKELGLDVIITDHHEPGPELPDVH
AIVHPKQPGCTYPFKELAGVGVAFKLAHALLGELPDELLDLAAIGTIADLVPLHDENRLI
ATLGLERLRRTNRLGLKELIKLSGGDIGEANEETVGFQLAPRLNAVGRIEQADPAVHLLM
SEDSFEAEELAAEIDQLNKERQKMVSKMTDEAIEMVERQGLDQTAIVVAKAGWNPGVVGI
VASKLVDRFYRPAIVLGIDEEKGIAKGSARSIRGFNLFESLSECRDILPHFGGHPMAAGM
TLKAEDVPNLRSRLNEIADNTLTEEDFVPVQEVDLVCSVEDITVESITEMNMLSPFGMLN
PKPHVLVENAVLEDVRKIGANKTHVKMTIKNESSQLDCVGFNKGELEEGIVPGSRISIVG
EMSINEWNNRKKPQLMIKDAAVSEWQLFDLRGKRTWEDTVSALPSAKRAIVSFKEDSTTL
LKTEGLRQEVQVISSEDQAKAFDLDGAYIVLLDPPPSLDMLARLLEGKAPERIYFIFLNH
EDHFLSTFPARDHFKWYYAFLLKRGAFDVKKHGSELAKHKGWSVETINFMTKVFFDLGFV
KIENGVLSVVSGAKKRDLTDSQTYQAKQQLMELDQKLNYSSAEELKEWLNKLMKQDSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgatgggaaatccagcgaccagatcaggataaggtcaaatca
ctcacagaacaattgcatataacacctcttgttgcgtccctgcttgtaaaaagaggcttt
gatacggcagaaagcgctaggctgtttttacatacaaaggatgccgatttttatgatcct
tttgaaatgaaaggcatgaaagaagcggcagatcgaataaaacaggcgatttcacaacaa
gaacagattatgatatatggcgattatgacgccgatggggttaccagtacgtcagtgatg
cttcacacgctgcaaaaactatcggctcaagttgatttttatatacctgaccgttttaaa
gaaggatatggacctaatgaacaggcgtttcgttcgattaaagaacggggcttctctttg
atcattacggttgatacaggaattgccgctgtgcatgaagcgaaggtggcgaaagaactc
gggctggatgtcattattacagatcatcatgaaccgggaccggagcttccggatgtccat
gcgatcgtccacccgaagcagccgggctgcacttacccgtttaaagagcttgcaggggtc
ggagtcgcgtttaagctggcccatgctttattgggtgaacttccggatgaactgcttgac
ctggcggcaatcggcaccattgctgaccttgtcccgctgcatgacgaaaacagattaatt
gcaacactaggacttgaaaggctccggcggacaaaccggctcggcttaaaagaactgatt
aagctgtcaggcggagacattggagaagcgaacgaagaaactgtcggatttcagctcgct
ccaaggctgaatgccgtcggaagaatcgaacaggcggacccagctgttcatttgctcatg
tcagaggattcgtttgaagcggaagagcttgccgcagaaattgaccagctgaacaaagag
cgccaaaaaatggtcagcaaaatgacggatgaagcgattgaaatggttgaacggcaaggg
ctcgatcaaactgcaattgtcgtggcaaaagccggatggaacccgggagtcgtcgggatt
gtggcctcaaagcttgtggaccgtttctatcgccctgctattgtgcttggcattgatgaa
gaaaaggggatcgctaaaggttcggcccgaagcatcaggggatttaatttatttgagagc
ctttctgaatgcagagatattcttcctcatttcggcggccatccaatggcagcggggatg
acgctcaaagccgaggatgtgccgaatttgcgaagcaggctgaatgaaatagcggacaat
acgcttacggaagaggattttgttcctgtacaggaagtcgaccttgtctgcagcgtcgag
gacattacagttgaaagcatcacagaaatgaacatgctttctccttttggcatgctgaac
ccgaaaccgcacgttctcgtagaaaacgcagtactggaagatgtccgcaagataggggca
aataaaactcatgtcaaaatgacgatcaaaaatgagtcgtctcagcttgattgcgtcggt
tttaataaaggtgagctcgaagaaggcatcgtacctggatcaagaatttccattgtcggt
gagatgtcaatcaacgaatggaacaatcggaaaaaaccgcagcttatgataaaggatgcc
gctgtttctgaatggcagctgtttgatttaaggggaaaacggacgtgggaagatacagtt
tccgccctcccatctgctaaacgggccattgtctctttcaaagaagactcaacaacactt
cttaaaactgaaggccttcgtcaagaagtgcaggtcatcagctcagaagatcaagcaaag
gcgtttgacctcgatggtgcatatattgtattgctggatccgccgccttcgttggacatg
ctcgcacgtttgctggaaggaaaggcgcctgagcggatatattttatttttctcaatcat
gaggaccactttttatcgacttttcccgcaagagaccactttaaatggtattatgcgttc
ttgctgaaaagaggcgcttttgatgtgaaaaaacacggttcagagcttgcaaaacataaa
ggctggtctgttgaaacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagagaatggtgtgctgtctgttgtgagcggagcaaagaaacgcgacttaacagac
tcacaaacatatcaggcgaaacagcagctgatggaactggatcaaaagctgaattattct
tctgctgaagagctgaaggaatggctgaataagctgatgaaacaagattcagaggcttat
gaaagtacgaggaggacataa
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