Bacillus sp. JS: MY9_2917
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Entry
MY9_2917 CDS
T02027
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03030
DNA replication
bjs03430
Mismatch repair
bjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY9_2917
03430 Mismatch repair
MY9_2917
03440 Homologous recombination
MY9_2917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bjs03032
]
MY9_2917
03400 DNA repair and recombination proteins [BR:
bjs03400
]
MY9_2917
Enzymes [BR:
bjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY9_2917
DNA replication proteins [BR:
bjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MY9_2917
DNA repair and recombination proteins [BR:
bjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MY9_2917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AFI29450
LinkDB
All DBs
Position
complement(2855599..2858946)
Genome browser
AA seq
1115 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAAAVEELVSEADRLGYASLALTDDHVMYGAIQFYKACKAKGIN
PIIGLTASVFTDDSELEAYPLVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLHSYREG
IIAITPGEKGYIETLLEGGLFEQAAQASLEFQSIFGKGAFYFSYQPFKGNQILSEQILKL
SEETGIPVTATGDVHYIRKEDKAAYRCLKAIKAGEKLTDAPAEVLPDLDFKPIEEMQNIY
REHPEALQASVEIAEQCRVDVSLGQTRLPSFPTPDGTPADDYLTGICMEGLRSRFGTPDE
RYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAAGSLVAYVLYITDV
DPIKHHLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPSRPGMTLDEARQQSPQLDKRLRESSLLQQVYTIAR
KIEGLPRHASTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEENIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLK
PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILEDTYGVIVYQEQIM
MIASRMAGFSLGEADLLRRAVSKKKKEILDRERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLYEAKGSGIRI
LPPSVNKSSFPFTVEDGSVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKVLEALIFSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLEESFSIKPKY
VETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLAAHGAVSILQAQRTVKRQLSLGVLL
SKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEVRQDK
IQFIMSRAELLENMDAEKAPSVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYERQK
QTIKLPESFHINADHQVLYRLKELLGQKNVVLKQW
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcacctgcaagtacatagcgggtacagcctgctaaacagcgccgcggct
gtggaagagctcgtcagtgaagctgacaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcttgcaaggcgaaagggattaac
ccgataatcggtttgacggcttctgtttttacagatgacagcgagcttgaagcctacccg
ctcgtcctgctggcaaaatcaaatacaggctatcaaaacctgctgaaaatcagcagcgtt
ctgcaatctaaatcaaaaggcgggctgaagccgaaatggcttcacagttatcgagaaggc
attatcgcaataacgcccggcgaaaaaggatatattgagacgcttcttgaaggaggcctg
ttcgaacaggccgctcaagcttcgctggagtttcagtctatattcggaaagggagccttt
tatttctcctatcagccttttaaagggaatcaaatcttgtctgaacagattctaaagctg
tcagaggaaacgggtatccctgttacggccacaggcgacgtgcactacataaggaaggaa
gataaggctgcctaccgttgtctgaaagcgattaaagcgggggaaaagctgacggatgca
cctgctgaagttctgcctgatctcgattttaaaccaattgaagaaatgcaaaacatttat
cgagagcatccagaggcattgcaagcttctgtggagatcgcggaacaatgccgagttgac
gtcagcctcgggcagactcgtctgccgtcttttccgaccccagacggaacgcccgctgat
gattatctaacgggtatctgtatggagggactccgcagccgtttcggcacgcctgatgaa
cgataccttcgccgacttcaatatgagcttgatgtcatcaagcggatgaagttcagcgat
tactttctgatcgtatgggattttatgaagcacgcccatgaaaaagggattgttacagga
ccgggacggggttctgcggctggctctcttgtggcatatgtgctgtatataacagatgta
gacccgattaagcatcaccttctgtttgagagatttttaaatcccgaacgcatcagcatg
ccggatattgatattgattttcccgatacaagaagggatgaagtcattcaatatgttcag
cagaaatacggtgcgatgcacgtcgcacagattatcacctttggaacacttgcggcaaag
gcggcgcttcgggacgtcggcagagtatttggcgtcagcccgaaggaggcagatcagctt
gcaaaactcattccttcaagaccgggcatgacgctggatgaagcgagacagcagtcaccg
cagctggataagcggcttcgggagtcaagcctgcttcagcaagtctatacaattgcccga
aaaatagaagggctgccaaggcatgcatccacccacgcagcaggcgttgtcctaagtgaa
gaaccgttaacagatgttgttccgcttcaggaagggcatgaagggatctatttaacgcaa
tatgcgatggatcatcttgaagacttgggccttttaaaaatggatttcttaggcttgagg
aatctgacgctgattgaatccatcacttcaatgattgaaaaagaagaaaacatcaaaata
gatctttcaagtatttcctacagcgatgataaaacgttctccttgctgtccaaaggggat
acgacagggattttccagctcgaatctgcagggatgagaagcgtcctgaagcggctaaaa
ccttcaggcctcgaggatattgtggcggtcaatgcgctgtaccggcccggtccgatggaa
aatattccgttatttattgaccgtaaacacggacgggcgcctgtccattatcctcatgag
gatttaaggagcattttggaagatacatatggcgttatagtgtatcaggaacaaattatg
atgattgcttcccgcatggcggggttttctttaggcgaagcagacctattgagaagggct
gtcagcaaaaagaaaaaagaaatcttagacagagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaagtctacgatttaatcgtcaaattc
gcaaactatggctttaaccgaagccatgcggtggcatacagcatgatcgggtgccagctt
gcgtatttgaaagctcattatccgttatattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatttctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaataaaagcagttttccgtttacagttgaagacggatctgtcagg
tacagcctccgcgccataaaaagtgtaggcgtctcagcagtcaaagatatatataaagca
aggaaagagaaaccatttgaagatctttttgatttctgctttcgcgtgccgtcaaaaagc
gtaaatcgcaaagtgcttgaagcacttattttttctggtgcgatggacgaatttggccaa
aaccgggccacgctgctcgcatccattgatgttgctttggaacatgctgagctattcgcc
gcggacgatgaccaaatgggattgtttttagaggaatcgttttcaattaagccgaagtat
gtggaaacggaagagcttccgctagtggatttacttgcatttgaaaaggaaacgctcggc
atttatttttcaaatcatccgctctccgccttccgaaaacagctcgctgcgcacggagca
gtctccattctgcaggctcagcggacagtcaaaaggcagctttcgctaggcgttttgctg
tcgaaaatcaaaacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctcagt
gatgaaaccggcgagatggaagccgtagtcttccctgaacaattcagacagctttcaccc
gttttaagagaaggcgctcttttgttcacagcggggaaatgcgaagtaagacaagataag
atccaattcatcatgtcccgggcagaattattagaaaatatggatgcagaaaaagcgcca
tcggtttatataaaaatagaaagcagtcagcatagccaggagatcctggcgaagattaag
cgcattttgctggagcataaaggggaaacaggcgtttatctctattatgaaaggcagaaa
cagacgattaagcttcctgagtcgtttcatatcaatgcggatcaccaggtgttatatcgc
ttaaaagagctgttgggtcaaaaaaacgtcgttttaaaacagtggtaa
DBGET
integrated database retrieval system
