Bacillus sp. JS: MY9_3391
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Entry
MY9_3391 CDS
T02027
Name
(GenBank) UvrD/Rep family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03420
Nucleotide excision repair
bjs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MY9_3391
03430 Mismatch repair
MY9_3391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bjs03400
]
MY9_3391
Enzymes [BR:
bjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY9_3391
DNA repair and recombination proteins [BR:
bjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY9_3391
MMR (mismatch excision repair)
Other MMR factors
MY9_3391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_30
Viral_helicase1
SLFN-g3_helicase
nSTAND3
AAA_16
DEAD
NACHT
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFI29924
LinkDB
All DBs
Position
complement(3312416..3314740)
Genome browser
AA seq
774 aa
AA seq
DB search
MNQKDKEWKEEQSRIDEVLQELGKKERFLETSAGGLKHDIIGLRKSFWEDVKVNFDDAHE
AVETMASIKQQAELLSDRERNHRRMAQQLKRIQQLKKSPYFGRIDFIENGEEQAERIYIG
LASCLDEKEEHFLIYDWRAPISSMYYNYSPGKAEYEVSGETIEGEMVLKRQFMIKNGDLK
AMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQNQIIRNEKSKFLIVQGAAGSGKT
SAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENMEQATFQEYIEHR
LGRRFQCESPFDQLEYCLTETKEGDFPTRLAGITWKAGLSFQQFIDEYVTRLSSEGMIFK
NIVFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKKERRKDWVVHEA
ELLDKEDYLDVYKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLKQAVRLLAFLDV
NQLYLQLFSGWGGESQHEKTAAIGELTRSAFTENKLLYEDAAPFLYMQDLIEGRKKNTKI
KHLFIDEAQDYSPLQMAYMRSIFPAASMTVLGDINQSIYAHAIHGDQRMDACFEDEPAEY
VRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRNGEMPIVAKTEGHESLCQKLAQEIGLHK
KKGHETIAVICKTAQQCIQAHAHMSEYADVRLIHKENQPFQKGVCVIPVYLAKGIEFDAV
LVYDASEEHYHTEHDRRLLYTACTRAMHMLTVFYTGEASPFVTAVPPHLYQNAE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaaggataaggaatggaaggaagagcagtcaagaatagatgaggtgctgcag
gaactcggaaaaaaagagcggtttctggaaacgtctgcgggcgggttgaagcatgatatc
atcggattaagaaaaagcttttgggaggatgtgaaggttaattttgatgatgcccatgaa
gcggttgaaacgatggcaagcattaagcagcaggcagagctgctgtctgatcgggaacgg
aatcatcggcgcatggctcagcagctcaaacgaattcaacaattaaaaaaatcgccttat
ttcggacggattgattttattgaaaacggcgaggagcaggcagagcgaatttatatcggt
ttagcttcctgtttggatgagaaggaggaacactttctgatttatgactggagggcgccg
atatcaagtatgtactacaattattccccaggaaaagcggagtacgaggtgtccggtgaa
acgatagaaggggaaatggtgctgaaacgacagtttatgatcaaaaacggcgatctcaag
gcgatgtttaataccgatatgacgattggcgatgaaatgctgcaagaggtattaagccat
cattccgatacccaaatgaaaaacatcgtgtctacgattcagaaagaacaaaatcagatt
atccgtaatgaaaaaagcaaattcctgatcgtgcagggagcggctgggagcggaaaaacc
tcggcagcgcttcagcgtgtcgcttatttgttatacaggcaccgcggcgtcattgatgcc
ggacaaatcgttttattttctcctaacttcttatttaacagctatgtctcctctgttttg
cctgagttaggagaagagaatatggagcaggcgacgtttcaggaatatatcgagcatcgg
cttggccgcaggtttcaatgtgaaagcccctttgaccagcttgaatattgcctgactgaa
acaaaggaaggcgattttccaacaaggcttgcgggtatcacatggaaggcgggtttatct
tttcagcaattcattgatgaatacgtcacaaggctgtcctctgaagggatgatttttaaa
aatattgttttccgcggccaaaagctgattacaaaggaacagattcaatcctatttttac
tcattggatcaaaatcactcgatcccgaaccggatggaacaaaccgcgaagtggctgctg
agtgagcttaacaagcttgagaaaaaggagcggcgaaaggattgggtcgttcatgaagct
gagctgctcgacaaagaggactacttggacgtgtacaagaaactgcaggaaaggaaacgg
ttcagcgagagtacgtttaacgattatcaaagagagcagcagctgcttgccgctatcatt
gtgaaaaaagctttcaaaccgctcaaacaagcggtcagactcctggcatttcttgatgtg
aaccagctgtatctgcaattgttttccggatggggaggggaatcccagcatgagaagacg
gcagcgataggagagctgacccgttcggcatttacggaaaataaattgctctatgaggac
gcggcaccgtttctttatatgcaggatctgattgagggcagaaagaaaaatacgaagatc
aaacacctatttattgacgaagcccaggactattcaccgctgcagatggcttacatgaga
agcatttttccggctgccagcatgacagtgcttggtgatatcaatcagtctatctacgct
catgccatacacggggatcagcgtatggatgcgtgctttgaagatgagcctgctgagtat
gttcgtttaaagagaacgtacagatcgacaaggcagattgtcgagtttacaaaagcgatg
cttcaagatggggcggatattgagccgtttaacagaaacggggaaatgccgatcgtggcc
aaaactgaagggcatgagagcctttgccaaaagctcgcgcaagaaattggactgcacaag
aaaaaagggcacgaaacaatagccgtcatttgcaagactgcgcagcaatgcatacaggcg
cacgcccacatgagtgaatatgcagatgttcgcctgattcataaagaaaatcaaccattc
caaaagggtgtttgcgtgattcccgtgtatttagcgaagggaattgaatttgacgcagta
cttgtctatgatgcatctgaagaacactatcatacagagcacgaccgcaggttattatat
actgcgtgcacccgtgcaatgcacatgctgacggtattttatacaggtgaagccagtccg
tttgtaaccgctgtgccgcctcacttatatcagaatgctgaatga
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integrated database retrieval system
