Bacillus sp. JS: MY9_4031
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Entry
MY9_4031 CDS
T02027
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY9_4031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjs03019
]
MY9_4031
03009 Ribosome biogenesis [BR:
bjs03009
]
MY9_4031
Enzymes [BR:
bjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MY9_4031
Messenger RNA biogenesis [BR:
bjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MY9_4031
Ribosome biogenesis [BR:
bjs03009
]
Prokaryotic type
rRNA helicases
MY9_4031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFI30563
LinkDB
All DBs
Position
complement(3917317..3918756)
Genome browser
AA seq
479 aa
AA seq
DB search
MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL
CELADWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQK
SHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTML
FSATLPQDIEKLSRQYMQNPEHIEIKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENP
DSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVA
ARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVAAFEKRFLADIEEYIG
FEIQKMEAPSQEEVARKKPEFLAKMNDRPESKKDKSEELNKDIMKLYFNGGKKKKIRAVD
FVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLQVMKNTTVKGKKLKVNKANK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattttaaaaactatcaaatcagtcatgacattttacgagcactggaaggactg
ggatatacagaaccgaccaaggtgcagcagagcgtgatccccgctgcccttgaacgaaag
gatcttgtcgtcaaatctcagacgggaagcgggaaaacggcttcgttcgggattcctctc
tgtgagctggcggattgggatgaaaacaagccgcaggcgcttattttaacaccgacccgt
gagcttgcggtgcaagtaaaagaggatatcacgaacatcggacgatttaaacgaatcaaa
gcgacagccgtatttggaaagtcctccttcgataaacaaaaagccgagcttaagcaaaaa
agccacattgttgttggcacgccgggacgtgttctggatcatattgaaaaaggcacgctg
ccgttggatcgtctctcttatttggtcattgatgaagcggatgagatgctgaatatgggc
ttcatcgagcaggtggaggcgattatcaagcatctgccgactgagcgcacgacgatgctg
ttttcagcgacgctgccgcaggatatcgagaagctgagccgtcaatatatgcaaaacccg
gagcatatcgaaatcaaagcggccggcctaaccacaagaaatattgaacatgcggtgatt
caagtaagagaagagaataaattttcattgctgaaagatgtgctgatgacggagaatccc
gatagctgcatcattttctgccgaacgaaagagcatgtcaatcagctgaccgatgaattg
gatgacttaggatatccatgcgataaaattcacggcggaatgattcaggaagaccgattc
gacgtcatgaatgaatttaaacggggcgagtaccgttacctagtcgcgacagatgtcgcc
gcgcgcgggattgatattgaaaatatctcccttgtcatcaactatgatctgccgcttgaa
aaggaaagctacgtgcaccgcacaggccggacaggtcgcgcagggaacaaaggaaaggcc
atttcgtttgtcgcggccttcgaaaaacggtttttagccgacattgaagaatatatcgga
tttgagattcaaaaaatggaggccccttctcaagaggaagtggctagaaagaaacctgaa
tttctagctaaaatgaatgaccggccggaaagcaaaaaggacaaaagcgaagagctgaat
aaagacattatgaagctgtattttaacggcggaaagaaaaagaaaataagagccgttgat
tttgtaggaacgattgccaaaattgatggtgtgtcagctgatgacatcggcatcatcacg
attatggataacgcctcatacgttgagattttaaatgggaaaggacctcatgttctccaa
gtgatgaagaacacaaccgtcaaagggaaaaagctcaaggtgaataaagcgaataaatga
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